STRINGSTRING
GACE_0004 GACE_0004 GACE_0108 GACE_0108 hemC hemC hemL hemL GACE_0111 GACE_0111 hemA hemA GACE_0308 GACE_0308 cobS cobS GACE_0409 GACE_0409 cobQ cobQ GACE_0916 GACE_0916 GACE_1260 GACE_1260 gltX gltX GACE_1532 GACE_1532 GACE_1786 GACE_1786 GACE_1790 GACE_1790 GACE_1791 GACE_1791 GACE_1792 GACE_1792 GACE_1793 GACE_1793 GACE_1794 GACE_1794 GACE_1795 GACE_1795 GACE_1796 GACE_1796 GACE_1798 GACE_1798 GACE_1800 GACE_1800 GACE_1805 GACE_1805 GACE_1857 GACE_1857 GACE_2169 GACE_2169
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GACE_0004Radical SAM domain protein. (386 aa)
GACE_0108Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. (249 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (291 aa)
hemLGlutamate-1-semialdehyde aminotransferase. (422 aa)
GACE_0111Porphobilinogen synthase; Belongs to the ALAD family. (302 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (440 aa)
GACE_0308L-threonine 3-O-phosphate decarboxylase. (332 aa)
cobSCobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (241 aa)
GACE_0409Adenosylcobinamide-phosphate guanylyltransferase CobY. (174 aa)
cobQCobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (464 aa)
GACE_0916Radical SAM domain protein. (458 aa)
GACE_1260Siroheme synthase. (230 aa)
gltXGlutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (552 aa)
GACE_1532Radical SAM domain heme biosynthesis protein. (389 aa)
GACE_1786Uroporphyrinogen-III synthase. (231 aa)
GACE_1790Cobalt-precorrin-6 synthase, anaerobic. (307 aa)
GACE_1791Cobalt-precorrin-8x methylmutase. (201 aa)
GACE_1792Cobalt-precorrin-3b C17-methyltransferase. (231 aa)
GACE_1793Cobalamin biosynthesis protein CbiG. (199 aa)
GACE_1794Cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. (235 aa)
GACE_1795Cobalt-precorrin-2 C20-methyltransferase. (196 aa)
GACE_1796Cobalt-precorrin-6y C15-methyltransferase [decarboxylating]. (179 aa)
GACE_1798Cobalt-precorrin-6y C5-methyltransferase. (182 aa)
GACE_1800Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. (232 aa)
GACE_1805Cobyrinic acid A,C-diamide synthase. (424 aa)
GACE_1857Adenosylcobinamide amidohydrolase. (184 aa)
GACE_2169ATP--cobalamin adenosyltransferase. (164 aa)
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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