STRINGSTRING
GACE_0093 GACE_0093 uppS uppS GACE_0601 GACE_0601 GACE_0690 GACE_0690 GACE_0723 GACE_0723 GACE_0766 GACE_0766 GACE_0794 GACE_0794 GACE_1175 GACE_1175 GACE_1176 GACE_1176 mvk mvk GACE_1301 GACE_1301 GACE_1337 GACE_1337 fni fni GACE_1692 GACE_1692 GACE_1860 GACE_1860
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GACE_00933-ketoacyl-CoA thiolase. (424 aa)
uppSUndecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (243 aa)
GACE_0601Undecaprenyl diphosphate synthase. (201 aa)
GACE_0690Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (301 aa)
GACE_07233-ketoacyl-CoA thiolase. (393 aa)
GACE_07663-ketoacyl-CoA thiolase. (398 aa)
GACE_0794acetyl-CoA acetyltransferase. (391 aa)
GACE_11753-ketoacyl-CoA thiolase. (384 aa)
GACE_1176Hydroxymethylglutaryl-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family. (345 aa)
mvkMevalonate kinase; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)- mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (293 aa)
GACE_1301Isopentenyl phosphate kinase. (235 aa)
GACE_1337Hypothetical protein; Catalyzes the addition of 3 molecules of isopentenyl diphosphate (IPP) onto dimethylallyl diphosphate (DMAPP) to form geranylgeranyl pyrophosphate (GGPP). Catalyzes the synthesis of geranylgeranyl pyrophosphate as a major product and of farnesyl pyrophosphate in smaller amounts. (319 aa)
fniIsopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (359 aa)
GACE_1692Acetyl-CoA C-acyltransferase. (394 aa)
GACE_1860Hydroxymethylglutaryl-CoA reductase. (420 aa)
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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