Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACI59849.1 | ACI60325.1 | UUR10_0066 | UUR10_0067 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.870 |
| ACI59849.1 | secG | UUR10_0066 | UUR10_0062 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | 0.461 |
| ACI60007.1 | secA | UUR10_0684 | UUR10_0134 | Preprotein translocase, SecE subunit family; Identified by match to protein family HMM TIGR00964; Belongs to the SecE/SEC61-gamma family. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.993 |
| ACI60007.1 | secG | UUR10_0684 | UUR10_0062 | Preprotein translocase, SecE subunit family; Identified by match to protein family HMM TIGR00964; Belongs to the SecE/SEC61-gamma family. | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | 0.999 |
| ACI60007.1 | secY | UUR10_0684 | UUR10_0245 | Preprotein translocase, SecE subunit family; Identified by match to protein family HMM TIGR00964; Belongs to the SecE/SEC61-gamma family. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.999 |
| ACI60144.1 | ACI60361.1 | UUR10_0658 | UUR10_0657 | Oligopeptide transport system permease protein; Identified by match to protein family HMM PF00528. | Oligopeptide transport system permease protein; Identified by match to protein family HMM PF00528. | 0.999 |
| ACI60322.1 | trxB | UUR10_0694 | UUR10_0080 | Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM PF05768; Belongs to the thioredoxin family. | Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF03486; match to protein family HMM PF07992. | 0.998 |
| ACI60325.1 | ACI59849.1 | UUR10_0067 | UUR10_0066 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.870 |
| ACI60325.1 | secG | UUR10_0067 | UUR10_0062 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | 0.461 |
| ACI60361.1 | ACI60144.1 | UUR10_0657 | UUR10_0658 | Oligopeptide transport system permease protein; Identified by match to protein family HMM PF00528. | Oligopeptide transport system permease protein; Identified by match to protein family HMM PF00528. | 0.999 |
| msrA | trxB | UUR10_0286 | UUR10_0080 | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF03486; match to protein family HMM PF07992. | 0.440 |
| secA | ACI60007.1 | UUR10_0134 | UUR10_0684 | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | Preprotein translocase, SecE subunit family; Identified by match to protein family HMM TIGR00964; Belongs to the SecE/SEC61-gamma family. | 0.993 |
| secA | secG | UUR10_0134 | UUR10_0062 | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | 0.999 |
| secA | secY | UUR10_0134 | UUR10_0245 | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.999 |
| secG | ACI59849.1 | UUR10_0062 | UUR10_0066 | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.461 |
| secG | ACI60007.1 | UUR10_0062 | UUR10_0684 | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | Preprotein translocase, SecE subunit family; Identified by match to protein family HMM TIGR00964; Belongs to the SecE/SEC61-gamma family. | 0.999 |
| secG | ACI60325.1 | UUR10_0062 | UUR10_0067 | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.461 |
| secG | secA | UUR10_0062 | UUR10_0134 | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.999 |
| secG | secY | UUR10_0062 | UUR10_0245 | Preprotein translocase, SecG subunit; Identified by match to protein family HMM TIGR00810. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.999 |
| secY | ACI60007.1 | UUR10_0245 | UUR10_0684 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Preprotein translocase, SecE subunit family; Identified by match to protein family HMM TIGR00964; Belongs to the SecE/SEC61-gamma family. | 0.999 |
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