31 items (Leishmania braziliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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protein homology

Your Input:
	LBRM_02_0640	Uncharacterized protein. (906 aa)
	LBRM_10_0210	Putative nucleolar protein. (471 aa)
	LBRM_11_0230	WD_REPEATS_REGION domain-containing protein. (680 aa)
	LBRM_13_1360	WD_REPEATS_REGION domain-containing protein. (758 aa)
	LBRM_15_1380	Putative nucleolar RNA binding protein. (444 aa)
	LBRM_17_1410	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1080 aa)
	LBRM_18_0920	Periodic tryptophan protein 2-like protein. (942 aa)
	LBRM_18_1020	Uncharacterized protein. (1268 aa)
	LBRM_19_0990	Putative U3 snoRNA-associated protein UTP11. (360 aa)
	LBRM_19_1360	PINc domain-containing protein. (209 aa)
	LBRM_20_0670	Contig, possible fusion of chromosomes 20 and 34. (468 aa)
	LBRM_23_0040	Putative beta propeller protein. (478 aa)
	LBRM_25_0380	Uncharacterized protein. (968 aa)
	LBRM_26_1270	Uncharacterized protein. (699 aa)
	LBRM_26_1720	Uncharacterized protein. (2767 aa)
	LBRM_28_0480	WD_REPEATS_REGION domain-containing protein. (795 aa)
	LBRM_28_0750	Sas10 domain-containing protein. (551 aa)
	LBRM_30_1420	Putative U3 small nuclear ribonucleoprotein (SnRNP). (288 aa)
	LBRM_30_3000	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (322 aa)
	LBRM_30_3290	Putative ATP-dependent RNA helicase. (1026 aa)
	LBRM_32_0210	Uncharacterized protein. (993 aa)
	LBRM_32_0770	Uncharacterized protein. (63 aa)
	LBRM_33_2800	NUC173 domain-containing protein. (1299 aa)
	LBRM_34_0660	Uncharacterized protein. (4181 aa)
	LBRM_34_1610	Putative RNA 3'-terminal phosphate cyclase. (362 aa)
	LBRM_34_1900	Uncharacterized protein. (1058 aa)
	LBRM_34_3860	WD_REPEATS_REGION domain-containing protein. (444 aa)
	LBRM_35_4460	Uncharacterized protein. (987 aa)
	LBRM_35_4830	Uncharacterized protein. (452 aa)
	LBRM_20_4880	Contig, possible fusion of chromosomes 20 and 34. (742 aa)
	LBRM_20_5100	Contig, possible fusion of chromosomes 20 and 34. (598 aa)

Your Current Organism:

Leishmania braziliensis

NCBI taxonomy Id: 5660
Other names: L. braziliensis, Leishmania (V.) braziliensis, Leishmania (Viannia) braziliensis, Leishmania brasiliensis, Leishmania viannia

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LBRM_02_0640	LBRM_10_0210	A4H3F7	A4H602	Uncharacterized protein.	Putative nucleolar protein.	0.985
LBRM_02_0640	LBRM_11_0230	A4H3F7	A4H6H1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
LBRM_02_0640	LBRM_13_1360	A4H3F7	A4H7E0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
LBRM_02_0640	LBRM_15_1380	A4H3F7	A4H8A6	Uncharacterized protein.	Putative nucleolar RNA binding protein.	0.999
LBRM_02_0640	LBRM_17_1410	A4H3F7	A4H984	Uncharacterized protein.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.999
LBRM_02_0640	LBRM_18_0920	A4H3F7	A4H9J4	Uncharacterized protein.	Periodic tryptophan protein 2-like protein.	0.999
LBRM_02_0640	LBRM_18_1020	A4H3F7	A4H9K4	Uncharacterized protein.	Uncharacterized protein.	0.984
LBRM_02_0640	LBRM_19_0990	A4H3F7	A4HA25	Uncharacterized protein.	Putative U3 snoRNA-associated protein UTP11.	0.999
LBRM_02_0640	LBRM_19_1360	A4H3F7	A4HA60	Uncharacterized protein.	PINc domain-containing protein.	0.997
LBRM_02_0640	LBRM_20_0670	A4H3F7	A4HAI3	Uncharacterized protein.	Contig, possible fusion of chromosomes 20 and 34.	0.999
LBRM_02_0640	LBRM_20_4880	A4H3F7	E9AIC1	Uncharacterized protein.	Contig, possible fusion of chromosomes 20 and 34.	0.999
LBRM_02_0640	LBRM_20_5100	A4H3F7	E9AIE3	Uncharacterized protein.	Contig, possible fusion of chromosomes 20 and 34.	0.999
LBRM_02_0640	LBRM_23_0040	A4H3F7	A4HCL6	Uncharacterized protein.	Putative beta propeller protein.	0.987
LBRM_02_0640	LBRM_25_0380	A4H3F7	A4HDY5	Uncharacterized protein.	Uncharacterized protein.	0.997
LBRM_02_0640	LBRM_26_1270	A4H3F7	A4HEY0	Uncharacterized protein.	Uncharacterized protein.	0.993
LBRM_02_0640	LBRM_26_1720	A4H3F7	A4HF25	Uncharacterized protein.	Uncharacterized protein.	0.993
LBRM_02_0640	LBRM_28_0480	A4H3F7	A4HG86	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
LBRM_02_0640	LBRM_28_0750	A4H3F7	A4HGB3	Uncharacterized protein.	Sas10 domain-containing protein.	0.999
LBRM_02_0640	LBRM_30_1420	A4H3F7	A4HI82	Uncharacterized protein.	Putative U3 small nuclear ribonucleoprotein (SnRNP).	0.980
LBRM_02_0640	LBRM_30_3000	A4H3F7	A4HIN5	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999

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