STRINGSTRING
LBRM_03_0810 LBRM_03_0810 LbrM04_V2.0780 LbrM04_V2.0780 LBRM_05_0470 LBRM_05_0470 LBRM_09_0020 LBRM_09_0020 LBRM_10_0830 LBRM_10_0830 LBRM_10_1130 LBRM_10_1130 LbrM11_V2.0090 LbrM11_V2.0090 LBRM_15_0130 LBRM_15_0130 LBRM_16_0890 LBRM_16_0890 LBRM_18_1640 LBRM_18_1640 LBRM_22_1260 LBRM_22_1260 LBRM_23_0570 LBRM_23_0570 LBRM_24_0240 LBRM_24_0240 PUF8 PUF8 LbrM_25_2590 LbrM_25_2590 LBRM_26_0030 LBRM_26_0030 LBRM_27_0060 LBRM_27_0060 LBRM_27_0540 LBRM_27_0540 LBRM_27_1590 LBRM_27_1590 LBRM_27_2160 LBRM_27_2160 LBRM_28_1410 LBRM_28_1410 LBRM_28_2050 LBRM_28_2050 LBRM_30_0700 LBRM_30_0700 LBRM_31_0300 LBRM_31_0300 LBRM_31_0310 LBRM_31_0310 LBRM_31_1210 LBRM_31_1210 LBRM_32_0650 LBRM_32_0650 LBRM_32_2450 LBRM_32_2450 LBRM_32_3050 LBRM_32_3050 LBRM_33_1620 LBRM_33_1620 LBRM_33_2140 LBRM_33_2140 LBRM_33_2190 LBRM_33_2190 LBRM_33_2680 LBRM_33_2680 LBRM_34_1730 LBRM_34_1730 LBRM_35_2030 LBRM_35_2030 LBRM_35_2070 LBRM_35_2070 LBRM_35_4640 LBRM_35_4640 LBRM_35_4900 LBRM_35_4900 LBRM_35_6730 LBRM_35_6730 LBRM_35_6860 LBRM_35_6860 LBRM_35_7290 LBRM_35_7290 LBRM_20_5830 LBRM_20_5830 LBRM_31_0820 LBRM_31_0820
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LBRM_03_0810Putative peter pan protein. (372 aa)
LbrM04_V2.0780Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (670 aa)
LBRM_05_0470Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (640 aa)
LBRM_09_0020Uncharacterized protein. (373 aa)
LBRM_10_0830Uncharacterized protein. (943 aa)
LBRM_10_1130RNA-binding protein-like protein. (390 aa)
LbrM11_V2.0090Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (743 aa)
LBRM_15_0130Putative ATP-dependent RNA helicase. (683 aa)
LBRM_16_0890Uncharacterized protein. (662 aa)
LBRM_18_1640Uncharacterized protein. (654 aa)
LBRM_22_1260Protein MAK16 homolog; Belongs to the MAK16 family. (268 aa)
LBRM_23_0570Ribosomal RNA methyltransferase-like protein. (285 aa)
LBRM_24_0240Putative ATP-dependent RNA helicase. (606 aa)
PUF8PUF8 protein. (577 aa)
LbrM_25_2590Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (842 aa)
LBRM_26_0030Brix domain containing-like protein. (362 aa)
LBRM_27_0060RNA helicase. (690 aa)
LBRM_27_0540Ribosome biogenesis protein. (330 aa)
LBRM_27_1590CBF domain-containing protein. (855 aa)
LBRM_27_2160Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (927 aa)
LBRM_28_1410Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (897 aa)
LBRM_28_2050Bms1-type G domain-containing protein. (1256 aa)
LBRM_30_0700Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (216 aa)
LBRM_31_0300Putative nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (625 aa)
LBRM_31_0310WD_REPEATS_REGION domain-containing protein. (448 aa)
LBRM_31_1210Uncharacterized protein. (753 aa)
LBRM_32_0650Putative RNA helicase. (584 aa)
LBRM_32_2450RNA helicase. (770 aa)
LBRM_32_3050Putative RNA-binding protein. (446 aa)
LBRM_33_162060S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (181 aa)
LBRM_33_2140Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (652 aa)
LBRM_33_2190WD_REPEATS_REGION domain-containing protein. (584 aa)
LBRM_33_2680Putative ras-like small GTPases. (565 aa)
LBRM_34_1730Uncharacterized protein. (273 aa)
LBRM_35_2030Putative DEAD box RNA helicase; Belongs to the DEAD box helicase family. (654 aa)
LBRM_35_2070Uncharacterized protein. (633 aa)
LBRM_35_4640ATP-dependent RNA helicase-like protein. (974 aa)
LBRM_35_4900Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (227 aa)
LBRM_35_6730Putative 40S ribosomal protein S8. (260 aa)
LBRM_35_6860Uncharacterized protein. (700 aa)
LBRM_35_7290Uncharacterized protein. (268 aa)
LBRM_20_5830Contig, possible fusion of chromosomes 20 and 34. (316 aa)
LBRM_31_0820FtsJ domain-containing protein. (331 aa)
Your Current Organism:
Leishmania braziliensis
NCBI taxonomy Id: 5660
Other names: L. braziliensis, Leishmania (V.) braziliensis, Leishmania (Viannia) braziliensis, Leishmania brasiliensis, Leishmania viannia
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