STRINGSTRING
LBRM_01_0310 LBRM_01_0310 LBRM_01_0460 LBRM_01_0460 LBRM_01_0470 LBRM_01_0470 LBRM_02_0640 LBRM_02_0640 LBRM_04_0170 LBRM_04_0170 LBRM_04_0290 LBRM_04_0290 LbrM04_V2.0780 LbrM04_V2.0780 LBRM_05_0360 LBRM_05_0360 LBRM_06_0150 LBRM_06_0150 LBRM_06_0510 LBRM_06_0510 LBRM_07_0490 LBRM_07_0490 LBRM_07_0560 LBRM_07_0560 LBRM_07_0640 LBRM_07_0640 LBRM_08_0470 LBRM_08_0470 LBRM_09_0020 LBRM_09_0020 LBRM_10_1130 LBRM_10_1130 LbrM11_V2.0090 LbrM11_V2.0090 LBRM_11_0230 LBRM_11_0230 LBRM_11_0550 LBRM_11_0550 LBRM_12_0580 LBRM_12_0580 LBRM_12_0590 LBRM_12_0590 LBRM_13_1360 LBRM_13_1360 LBRM_14_0010 LBRM_14_0010 LBRM_14_0420 LBRM_14_0420 LBRM_14_0550 LBRM_14_0550 LBRM_15_0400 LBRM_15_0400 LBRM_15_0430 LBRM_15_0430 LBRM_15_1380 LBRM_15_1380 LBRM_15_1470 LBRM_15_1470 LBRM_16_0060 LBRM_16_0060 LBRM_16_0200 LBRM_16_0200 LBRM_16_0890 LBRM_16_0890 LBRM_16_1450 LBRM_16_1450 LBRM_17_1410 LBRM_17_1410 LBRM_18_0250 LBRM_18_0250 LBRM_18_1000 LBRM_18_1000 LBRM_18_1020 LBRM_18_1020 LBRM_19_0130 LBRM_19_0130 LBRM_19_0410 LBRM_19_0410 LBRM_19_0990 LBRM_19_0990 LBRM_19_1360 LBRM_19_1360 RH RH RH-2 RH-2 LBRM_20_1540 LBRM_20_1540 LBRM_20_2300 LBRM_20_2300 LBRM_20_2660 LBRM_20_2660 LBRM_20_2890 LBRM_20_2890 LBRM_20_3610 LBRM_20_3610 LBRM_20_3910 LBRM_20_3910 LBRM_20_4100 LBRM_20_4100 LBRM_22_1260 LBRM_22_1260 LBRM_22_1490 LBRM_22_1490 LBRM_23_0040 LBRM_23_0040 LBRM_23_0570 LBRM_23_0570 LBRM_23_1170 LBRM_23_1170 LBRM_23_1300 LBRM_23_1300 LBRM_24_0240 LBRM_24_0240 LBRM_24_0830 LBRM_24_0830 LBRM_24_1360 LBRM_24_1360 LBRM_24_2150 LBRM_24_2150 LBRM_25_0030 LBRM_25_0030 LBRM_25_0380 LBRM_25_0380 LBRM_26_0030 LBRM_26_0030 LBRM_26_0160 LBRM_26_0160 LBRM_26_0170 LBRM_26_0170 LBRM_26_0890 LBRM_26_0890 LBRM_26_1180 LBRM_26_1180 LBRM_26_1270 LBRM_26_1270 LBRM_26_1720 LBRM_26_1720 LBRM_26_2260 LBRM_26_2260 LBRM_27_0060 LBRM_27_0060 LBRM_27_0390 LBRM_27_0390 LBRM_27_0540 LBRM_27_0540 LBRM_27_1210 LBRM_27_1210 LBRM_27_1440 LBRM_27_1440 LBRM_27_2160 LBRM_27_2160 LBRM_27_2430 LBRM_27_2430 LBRM_28_0310 LBRM_28_0310 LBRM_28_0750 LBRM_28_0750 LBRM_28_1410 LBRM_28_1410 LBRM_28_2050 LBRM_28_2050 LBRM_29_0250 LBRM_29_0250 LBRM_29_0480 LBRM_29_0480 LBRM_29_0490 LBRM_29_0490 LBRM_29_0570 LBRM_29_0570 LBRM_29_0770 LBRM_29_0770 LBRM_29_1470 LBRM_29_1470 LBRM_29_1480 LBRM_29_1480 LBRM_30_0220 LBRM_30_0220 LBRM_30_0560 LBRM_30_0560 LBRM_30_0700 LBRM_30_0700 LBRM_30_1420 LBRM_30_1420 LBRM_30_1480 LBRM_30_1480 LBRM_30_1570 LBRM_30_1570 LBRM_30_1890 LBRM_30_1890 LBRM_30_3000 LBRM_30_3000 LBRM_30_3290 LBRM_30_3290 LBRM_31_0310 LBRM_31_0310 LBRM_32_0210 LBRM_32_0210 LBRM_32_0650 LBRM_32_0650 LBRM_32_0770 LBRM_32_0770 LBRM_32_3750 LBRM_32_3750 LBRM_32_3780 LBRM_32_3780 LBRM_33_2430 LBRM_33_2430 LBRM_33_2800 LBRM_33_2800 LBRM_34_0760 LBRM_34_0760 LBRM_34_1320 LBRM_34_1320 LBRM_34_1730 LBRM_34_1730 LBRM_34_1900 LBRM_34_1900 LBRM_34_2420 LBRM_34_2420 LBRM_34_2900 LBRM_34_2900 LBRM_34_3260 LBRM_34_3260 LBRM_34_3860 LBRM_34_3860 LBRM_34_4010 LBRM_34_4010 LBRM_34_5050 LBRM_34_5050 LBRM_35_0430 LBRM_35_0430 LBRM_35_2040 LBRM_35_2040 LBRM_35_3220 LBRM_35_3220 LBRM_35_3240 LBRM_35_3240 LBRM_35_3290 LBRM_35_3290 LBRM_35_3880 LBRM_35_3880 LBRM_35_4460 LBRM_35_4460 LBRM_35_4640 LBRM_35_4640 LBRM_35_4830 LBRM_35_4830 LBRM_35_4900 LBRM_35_4900 LBRM_35_5140 LBRM_35_5140 LBRM_35_5310 LBRM_35_5310 LBRM_35_6730 LBRM_35_6730 LBRM_35_6860 LBRM_35_6860 LBRM_35_7290 LBRM_35_7290 LBRM_20_4670 LBRM_20_4670 LBRM_20_4880 LBRM_20_4880 LBRM_20_5050 LBRM_20_5050 LBRM_20_5570 LBRM_20_5570 LBRM_20_5830 LBRM_20_5830 LBRM_31_0820 LBRM_31_0820 LBRM_32_2170 LBRM_32_2170
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LBRM_01_0310Pseudouridylate synthase-like protein. (413 aa)
LBRM_01_046040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (242 aa)
LBRM_01_047040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
LBRM_02_0640Uncharacterized protein. (906 aa)
LBRM_04_0170Putative exosome complex exonuclease RRP40. (300 aa)
LBRM_04_0290RNA pseudouridylate synthase-like protein. (1340 aa)
LbrM04_V2.0780Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (670 aa)
LBRM_05_0360Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (630 aa)
LBRM_06_0150Uncharacterized protein. (141 aa)
LBRM_06_0510SpoU_methylase domain-containing protein. (585 aa)
LBRM_07_0490Uncharacterized protein. (780 aa)
LBRM_07_0560Putative 60S ribosomal protein L7a. (264 aa)
LBRM_07_0640CLP1_P domain-containing protein. (1345 aa)
LBRM_08_0470Uncharacterized protein. (1400 aa)
LBRM_09_0020Uncharacterized protein. (373 aa)
LBRM_10_1130RNA-binding protein-like protein. (390 aa)
LbrM11_V2.0090Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (743 aa)
LBRM_11_0230WD_REPEATS_REGION domain-containing protein. (680 aa)
LBRM_11_0550Putative 40S ribosomal protein S21. (165 aa)
LBRM_12_0580Uncharacterized protein. (1853 aa)
LBRM_12_0590Uncharacterized protein. (1822 aa)
LBRM_13_1360WD_REPEATS_REGION domain-containing protein. (758 aa)
LBRM_14_0010Putative exosome complex exonuclease. (303 aa)
LBRM_14_0420Uncharacterized protein. (1068 aa)
LBRM_14_0550Uncharacterized protein. (1156 aa)
LBRM_15_0400PseudoU_synth_2 domain-containing protein. (1015 aa)
LBRM_15_0430Uncharacterized protein. (695 aa)
LBRM_15_1380Putative nucleolar RNA binding protein. (444 aa)
LBRM_15_1470Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
LBRM_16_0060Uncharacterized protein. (657 aa)
LBRM_16_0200Uncharacterized protein. (357 aa)
LBRM_16_0890Uncharacterized protein. (662 aa)
LBRM_16_1450Uncharacterized protein. (287 aa)
LBRM_17_1410RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1080 aa)
LBRM_18_0250Putative 60S ribosomal protein L7. (297 aa)
LBRM_18_1000Uncharacterized protein. (120 aa)
LBRM_18_1020Uncharacterized protein. (1268 aa)
LBRM_19_0130DEAD-boc ATP-dependent (RNA) helicase. (652 aa)
LBRM_19_0410Putative fibrillarin. (433 aa)
LBRM_19_0990Putative U3 snoRNA-associated protein UTP11. (360 aa)
LBRM_19_1360PINc domain-containing protein. (209 aa)
RHRH protein. (775 aa)
RH-2RH protein. (772 aa)
LBRM_20_1540ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (803 aa)
LBRM_20_2300Contig, possible fusion of chromosomes 20 and 34. (425 aa)
LBRM_20_2660Contig, possible fusion of chromosomes 20 and 34. (735 aa)
LBRM_20_2890Contig, possible fusion of chromosomes 20 and 34. (212 aa)
LBRM_20_3610Contig, possible fusion of chromosomes 20 and 34. (148 aa)
LBRM_20_3910H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (225 aa)
LBRM_20_4100Contig, possible fusion of chromosomes 20 and 34. (410 aa)
LBRM_22_1260Protein MAK16 homolog; Belongs to the MAK16 family. (268 aa)
LBRM_22_1490Putative exosome complex exonuclease RRP45 homolog. (363 aa)
LBRM_23_0040Putative beta propeller protein. (478 aa)
LBRM_23_0570Ribosomal RNA methyltransferase-like protein. (285 aa)
LBRM_23_1170Uncharacterized protein. (471 aa)
LBRM_23_1300S-adenosyl-methyltransferase mraW-like protein. (491 aa)
LBRM_24_0240Putative ATP-dependent RNA helicase. (606 aa)
LBRM_24_0830Putative phosphotransferase. (575 aa)
LBRM_24_1360WD_REPEATS_REGION domain-containing protein. (444 aa)
LBRM_24_215040S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (219 aa)
LBRM_25_0030Uncharacterized protein. (584 aa)
LBRM_25_0380Uncharacterized protein. (968 aa)
LBRM_26_0030Brix domain containing-like protein. (362 aa)
LBRM_26_0160Putative 60S ribosomal protein L7. (240 aa)
LBRM_26_0170Putative 60S ribosomal protein L7. (256 aa)
LBRM_26_0890Putative 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (149 aa)
LBRM_26_1180PseudoU_synth_2 domain-containing protein. (957 aa)
LBRM_26_1270Uncharacterized protein. (699 aa)
LBRM_26_1720Uncharacterized protein. (2767 aa)
LBRM_26_2260Putative 60S ribosomal protein L35. (127 aa)
LBRM_27_0060RNA helicase. (690 aa)
LBRM_27_0390Kri1_C domain-containing protein. (1055 aa)
LBRM_27_0540Ribosome biogenesis protein. (330 aa)
LBRM_27_1210Uncharacterized protein. (224 aa)
LBRM_27_1440C3H1-type domain-containing protein. (529 aa)
LBRM_27_2160Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (927 aa)
LBRM_27_2430Uncharacterized protein. (246 aa)
LBRM_28_0310Uncharacterized protein. (662 aa)
LBRM_28_0750Sas10 domain-containing protein. (551 aa)
LBRM_28_1410Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (897 aa)
LBRM_28_2050Bms1-type G domain-containing protein. (1256 aa)
LBRM_29_0250RIO domain-containing protein. (538 aa)
LBRM_29_0480Exonuclease domain-containing protein. (508 aa)
LBRM_29_0490Exonuclease domain-containing protein. (881 aa)
LBRM_29_0570Exonuclease domain-containing protein. (405 aa)
LBRM_29_0770Putative U3 small nucleolar ribonucleoprotein protein MPP10. (682 aa)
LBRM_29_1470Putative RNA binding protein. (322 aa)
LBRM_29_1480Putative RNA binding protein. (287 aa)
LBRM_30_0220rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (366 aa)
LBRM_30_0560Putative bystin. (469 aa)
LBRM_30_0700Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (216 aa)
LBRM_30_1420Putative U3 small nuclear ribonucleoprotein (SnRNP). (288 aa)
LBRM_30_1480RIO domain-containing protein. (486 aa)
LBRM_30_1570PseudoU_synth_2 domain-containing protein. (452 aa)
LBRM_30_1890RNA pseudouridylate synthase-like protein. (533 aa)
LBRM_30_3000KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (322 aa)
LBRM_30_3290Putative ATP-dependent RNA helicase. (1026 aa)
LBRM_31_0310WD_REPEATS_REGION domain-containing protein. (448 aa)
LBRM_32_0210Uncharacterized protein. (993 aa)
LBRM_32_0650Putative RNA helicase. (584 aa)
LBRM_32_0770Uncharacterized protein. (63 aa)
LBRM_32_3750Putative exosome-associated protein 2. (312 aa)
LBRM_32_3780Putative DEAD/DEAH box helicase. (684 aa)
LBRM_33_2430WD_REPEATS_REGION domain-containing protein. (867 aa)
LBRM_33_2800NUC173 domain-containing protein. (1299 aa)
LBRM_34_0760rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (469 aa)
LBRM_34_1320RRM domain-containing protein. (232 aa)
LBRM_34_1730Uncharacterized protein. (273 aa)
LBRM_34_1900Uncharacterized protein. (1058 aa)
LBRM_34_2420Uncharacterized protein. (340 aa)
LBRM_34_2900Uncharacterized protein. (412 aa)
LBRM_34_3260TP_methylase domain-containing protein. (462 aa)
LBRM_34_3860WD_REPEATS_REGION domain-containing protein. (444 aa)
LBRM_34_4010RNA helicase. (691 aa)
LBRM_34_5050PseudoU_synth_2 domain-containing protein. (754 aa)
LBRM_35_0430Putative nuclear protein family a (Nop10p). (63 aa)
LBRM_35_2040Putative DEAD box RNA helicase; Belongs to the DEAD box helicase family. (527 aa)
LBRM_35_3220Putative ATP-dependent RNA helicase. (954 aa)
LBRM_35_3240Putative exosome complex exonuclease rrp41. (246 aa)
LBRM_35_3290Fibrillarin. (233 aa)
LBRM_35_3880Uncharacterized protein. (393 aa)
LBRM_35_4460Uncharacterized protein. (987 aa)
LBRM_35_4640ATP-dependent RNA helicase-like protein. (974 aa)
LBRM_35_4830Uncharacterized protein. (452 aa)
LBRM_35_4900Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (227 aa)
LBRM_35_5140Putative exosome-associated protein 4. (221 aa)
LBRM_35_5310Uncharacterized protein; Belongs to the NOB1 family. (440 aa)
LBRM_35_6730Putative 40S ribosomal protein S8. (260 aa)
LBRM_35_6860Uncharacterized protein. (700 aa)
LBRM_35_7290Uncharacterized protein. (268 aa)
LBRM_20_4670Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (374 aa)
LBRM_20_4880Contig, possible fusion of chromosomes 20 and 34. (742 aa)
LBRM_20_5050Contig, possible fusion of chromosomes 20 and 34. (793 aa)
LBRM_20_5570Contig, possible fusion of chromosomes 20 and 34. (403 aa)
LBRM_20_5830Contig, possible fusion of chromosomes 20 and 34. (316 aa)
LBRM_31_0820FtsJ domain-containing protein. (331 aa)
LBRM_32_2170Probable ribosome biogenesis protein LBRM_32_2170; Probable pre-rRNA processing protein involved in ribosome biogenesis. (293 aa)
Your Current Organism:
Leishmania braziliensis
NCBI taxonomy Id: 5660
Other names: L. braziliensis, Leishmania (V.) braziliensis, Leishmania (Viannia) braziliensis, Leishmania brasiliensis, Leishmania viannia
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