24 items (Leishmania braziliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LBRM_35_3880	Uncharacterized protein. (393 aa)
	LBRM_02_0640	Uncharacterized protein. (906 aa)
	LBRM_07_0490	Uncharacterized protein. (780 aa)
	LBRM_11_0230	WD_REPEATS_REGION domain-containing protein. (680 aa)
	LBRM_14_0550	Uncharacterized protein. (1156 aa)
	LBRM_17_1410	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1080 aa)
	LBRM_24_2150	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (219 aa)
	LBRM_25_0380	Uncharacterized protein. (968 aa)
	LBRM_26_0890	Putative 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (149 aa)
	LBRM_26_1270	Uncharacterized protein. (699 aa)
	LBRM_27_0390	Kri1_C domain-containing protein. (1055 aa)
	LBRM_27_1210	Uncharacterized protein. (224 aa)
	LBRM_28_0750	Sas10 domain-containing protein. (551 aa)
	LBRM_28_2050	Bms1-type G domain-containing protein. (1256 aa)
	LBRM_29_0250	RIO domain-containing protein. (538 aa)
	LBRM_30_0700	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (216 aa)
	LBRM_30_1480	RIO domain-containing protein. (486 aa)
	LBRM_30_3290	Putative ATP-dependent RNA helicase. (1026 aa)
	LBRM_32_0650	Putative RNA helicase. (584 aa)
	LBRM_33_2430	WD_REPEATS_REGION domain-containing protein. (867 aa)
	LBRM_34_1900	Uncharacterized protein. (1058 aa)
	LBRM_34_3860	WD_REPEATS_REGION domain-containing protein. (444 aa)
	LBRM_35_5310	Uncharacterized protein; Belongs to the NOB1 family. (440 aa)
	LBRM_32_2170	Probable ribosome biogenesis protein LBRM_32_2170; Probable pre-rRNA processing protein involved in ribosome biogenesis. (293 aa)

Your Current Organism:

Leishmania braziliensis

NCBI taxonomy Id: 5660
Other names: L. braziliensis, Leishmania (V.) braziliensis, Leishmania (Viannia) braziliensis, Leishmania brasiliensis, Leishmania viannia

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LBRM_02_0640	LBRM_07_0490	A4H3F7	A4H4Z3	Uncharacterized protein.	Uncharacterized protein.	0.899
LBRM_02_0640	LBRM_11_0230	A4H3F7	A4H6H1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
LBRM_02_0640	LBRM_14_0550	A4H3F7	A4H7L4	Uncharacterized protein.	Uncharacterized protein.	0.930
LBRM_02_0640	LBRM_17_1410	A4H3F7	A4H984	Uncharacterized protein.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.999
LBRM_02_0640	LBRM_24_2150	A4H3F7	A4HDR9	Uncharacterized protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.933
LBRM_02_0640	LBRM_25_0380	A4H3F7	A4HDY5	Uncharacterized protein.	Uncharacterized protein.	0.997
LBRM_02_0640	LBRM_26_0890	A4H3F7	A4HEU3	Uncharacterized protein.	Putative 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.944
LBRM_02_0640	LBRM_26_1270	A4H3F7	A4HEY0	Uncharacterized protein.	Uncharacterized protein.	0.993
LBRM_02_0640	LBRM_27_0390	A4H3F7	A4HFF6	Uncharacterized protein.	Kri1_C domain-containing protein.	0.851
LBRM_02_0640	LBRM_27_1210	A4H3F7	A4HFN6	Uncharacterized protein.	Uncharacterized protein.	0.754
LBRM_02_0640	LBRM_28_0750	A4H3F7	A4HGB3	Uncharacterized protein.	Sas10 domain-containing protein.	0.999
LBRM_02_0640	LBRM_28_2050	A4H3F7	A4HGP1	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
LBRM_02_0640	LBRM_29_0250	A4H3F7	A4HH32	Uncharacterized protein.	RIO domain-containing protein.	0.550
LBRM_02_0640	LBRM_30_0700	A4H3F7	A4HI13	Uncharacterized protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.672
LBRM_02_0640	LBRM_30_1480	A4H3F7	A4HI88	Uncharacterized protein.	RIO domain-containing protein.	0.786
LBRM_02_0640	LBRM_30_3290	A4H3F7	A4HIR4	Uncharacterized protein.	Putative ATP-dependent RNA helicase.	0.999
LBRM_02_0640	LBRM_32_0650	A4H3F7	A4HK38	Uncharacterized protein.	Putative RNA helicase.	0.991
LBRM_02_0640	LBRM_33_2430	A4H3F7	A4HLS7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.930
LBRM_02_0640	LBRM_34_1900	A4H3F7	A4HML9	Uncharacterized protein.	Uncharacterized protein.	0.999
LBRM_02_0640	LBRM_34_3860	A4H3F7	A4HN59	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998

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