STRINGSTRING
LBRM_19_0130 LBRM_19_0130 LbrM01_V2.0740 LbrM01_V2.0740 LBRM_22_1400 LBRM_22_1400 LBRM_20_5050 LBRM_20_5050 LBRM_35_5950 LBRM_35_5950 LBRM_35_5440 LBRM_35_5440 LBRM_35_4640 LBRM_35_4640 LBRM_35_3220 LBRM_35_3220 LBRM_35_3050 LBRM_35_3050 LBRM_35_2740 LBRM_35_2740 LBRM_35_2370 LBRM_35_2370 LBRM_35_2040 LBRM_35_2040 LBRM_35_2030 LBRM_35_2030 LBRM_35_0990 LBRM_35_0990 LBRM_34_4010 LBRM_34_4010 LBRM_34_3010 LBRM_34_3010 LBRM_34_2220 LBRM_34_2220 LBRM_34_1120 LBRM_34_1120 LBRM_33_1970 LBRM_33_1970 LBRM_32_4160 LBRM_32_4160 LBRM_32_3780 LBRM_32_3780 LBRM_32_2450 LBRM_32_2450 LBRM_32_1560 LBRM_32_1560 LBRM_32_0650 LBRM_32_0650 LBRM_32_0470 LBRM_32_0470 LBRM_31_0360 LBRM_31_0360 LBRM_31_0070 LBRM_31_0070 LBRM_30_3290 LBRM_30_3290 LBRM_30_2240 LBRM_30_2240 LBRM_30_1430 LBRM_30_1430 LBRM_29_0600 LBRM_29_0600 LBRM_29_0210 LBRM_29_0210 LBRM_28_2270 LBRM_28_2270 LBRM_28_2000 LBRM_28_2000 LBRM_28_1700 LBRM_28_1700 LBRM_28_1410 LBRM_28_1410 LBRM_28_0790 LBRM_28_0790 LBRM_27_0060 LBRM_27_0060 LBRM_26_1580 LBRM_26_1580 LBRM_25_1610 LBRM_25_1610 LBRM_25_0620 LBRM_25_0620 LBRM_24_1330 LBRM_24_1330 LBRM_24_1110 LBRM_24_1110 LBRM_24_1060 LBRM_24_1060 LBRM_24_0770 LBRM_24_0770 LBRM_24_0620 LBRM_24_0620 LBRM_24_0240 LBRM_24_0240 LBRM_23_1900 LBRM_23_1900 LBRM_23_1500 LBRM_23_1500 LBRM_21_1700 LBRM_21_1700 LBRM_21_0670 LBRM_21_0670 REH2 REH2 LBRM_20_2180 LBRM_20_2180 LBRM_20_1760 LBRM_20_1760 LBRM_20_1540 LBRM_20_1540 LBRM_20_1240 LBRM_20_1240 RH RH LBRM_19_0270 LBRM_19_0270 LBRM_17_0940 LBRM_17_0940 LBRM_16_0060 LBRM_16_0060 LBRM_15_0130 LBRM_15_0130 LBRM_14_0810 LBRM_14_0810 JBP2 JBP2 LBRM_13_0320 LBRM_13_0320 LBRM_12_0280 LBRM_12_0280 LBRM_10_0140 LBRM_10_0140 LBRM_09_0910 LBRM_09_0910 LBRM_09_0090 LBRM_09_0090 LBRM_08_0080 LBRM_08_0080 LBRM_07_0360 LBRM_07_0360 LBRM_05_0360 LBRM_05_0360 LBRM_05_0140 LBRM_05_0140 LBRM_03_0590 LBRM_03_0590 LBRM_01_0280 LBRM_01_0280
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LBRM_19_0130DEAD-boc ATP-dependent (RNA) helicase. (652 aa)
LbrM01_V2.0740Probable eukaryotic initiation factor 4A; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity). (403 aa)
LBRM_22_1400Putative ATP-dependent DEAD/H RNA helicase. (1083 aa)
LBRM_20_5050Contig, possible fusion of chromosomes 20 and 34. (793 aa)
LBRM_35_5950Putative RNA helicase. (697 aa)
LBRM_35_5440Putative helicase. (1284 aa)
LBRM_35_4640ATP-dependent RNA helicase-like protein. (974 aa)
LBRM_35_3220Putative ATP-dependent RNA helicase. (954 aa)
LBRM_35_3050Putative pre-mRNA splicing factor ATP-dependent RNA helicase. (1080 aa)
LBRM_35_2740Putative DEAD/DEAH box helicase. (717 aa)
LBRM_35_2370Putative DEAD box RNA helicase; Belongs to the DEAD box helicase family. (571 aa)
LBRM_35_2040Putative DEAD box RNA helicase; Belongs to the DEAD box helicase family. (527 aa)
LBRM_35_2030Putative DEAD box RNA helicase; Belongs to the DEAD box helicase family. (654 aa)
LBRM_35_0990Putative DEAH-box RNA helicase. (943 aa)
LBRM_34_4010RNA helicase. (691 aa)
LBRM_34_3010Putative ATP-dependent RNA helicase. (860 aa)
LBRM_34_2220ATP-dependent RNA helicase-like protein. (1140 aa)
LBRM_34_1120Putative pre-mRNA splicing factor ATP-dependent RNA helicase. (705 aa)
LBRM_33_1970Putative DNA-dependent ATPase. (1103 aa)
LBRM_32_4160Putative DNA repair helicase. (803 aa)
LBRM_32_3780Putative DEAD/DEAH box helicase. (684 aa)
LBRM_32_2450RNA helicase. (770 aa)
LBRM_32_1560Putative DEAD/DEAH box helicase-like protein. (1678 aa)
LBRM_32_0650Putative RNA helicase. (584 aa)
LBRM_32_0470Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (604 aa)
LBRM_31_0360Putative ATP-dependent RNA helicase. (1190 aa)
LBRM_31_0070Helicase-like protein. (950 aa)
LBRM_30_3290Putative ATP-dependent RNA helicase. (1026 aa)
LBRM_30_2240ATP-dependent DEAD/H DNA helicase recQ family-like protein. (998 aa)
LBRM_30_1430Uncharacterized protein. (1235 aa)
LBRM_29_0600Putative DNA repair helicase. (1108 aa)
LBRM_29_0210Uncharacterized protein. (1591 aa)
LBRM_28_2270Putative mitochondrial DEAD box protein; Belongs to the DEAD box helicase family. (544 aa)
LBRM_28_2000DNA repair protein-like protein. (1288 aa)
LBRM_28_1700Putative DEAD box RNA helicase; Belongs to the DEAD box helicase family. (389 aa)
LBRM_28_1410Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (897 aa)
LBRM_28_0790Putative DNA repair protein. (736 aa)
LBRM_27_0060RNA helicase. (690 aa)
LBRM_26_1580Uncharacterized protein. (1878 aa)
LBRM_25_1610Putative helicase-like protein. (974 aa)
LBRM_25_0620Putative DNA repair protein. (1099 aa)
LBRM_24_1330Putative ATP-dependent DEAD/H DNA helicase recQ. (2031 aa)
LBRM_24_1110Putative pre-mRNA splicing factor. (1088 aa)
LBRM_24_1060Putative helicase-like protein. (1398 aa)
LBRM_24_0770Putative DNA repair and recombination protein RAD54. (1126 aa)
LBRM_24_0620Putative DNA helicase. (1096 aa)
LBRM_24_0240Putative ATP-dependent RNA helicase. (606 aa)
LBRM_23_1900ATP-dependent RNA Helicase. (972 aa)
LBRM_23_1500Putative DNA polymerase theta (Helicase domain only). (2239 aa)
LBRM_21_1700Putative RNA helicase. (413 aa)
LBRM_21_0670Putative RNA helicase. (696 aa)
REH2REH2 protein. (2250 aa)
LBRM_20_2180Contig, possible fusion of chromosomes 20 and 34. (686 aa)
LBRM_20_1760Contig, possible fusion of chromosomes 20 and 34. (759 aa)
LBRM_20_1540ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (803 aa)
LBRM_20_1240Contig, possible fusion of chromosomes 20 and 34. (1944 aa)
RHRH protein. (775 aa)
LBRM_19_0270SNF2/RAD54 related DNA helicase. (958 aa)
LBRM_17_0940Putative ATP-dependent RNA helicase. (2365 aa)
LBRM_16_0060Uncharacterized protein. (657 aa)
LBRM_15_0130Putative ATP-dependent RNA helicase. (683 aa)
LBRM_14_0810Putative SNF2 family helicase-like protein. (1258 aa)
JBP2Bifunctional helicase and thymine dioxygenase JBP2; Dioxygenase that catalyzes the first step of DNA base J (beta-d-glucosyl-HOMedU) biosynthesis by converting thymine to 5- hydroxymethyluracil (HOMedU). DNA base J is a hypermodified thymidine residue found in the genome of kinetoplastid parasites, which is localized primarily to repetitive DNA, namely the telomeres, and is implicated in the regulation of antigenic variation. Probably also acts as a DNA helicase. Recognizes and binds specific regions of the genome, hydrolyzes ATP and allows the DNA base J de novo synthesis. Involved in [...] (1098 aa)
LBRM_13_0320Putative RNA helicase. (1986 aa)
LBRM_12_0280Uncharacterized protein. (2600 aa)
LBRM_10_0140Putative DEAD/DEAH box helicase. (721 aa)
LBRM_09_0910DEAD/DEAH box helicase-like protein. (776 aa)
LBRM_09_0090Putative RNA helicase. (1281 aa)
LBRM_08_0080Putative ATP-dependent DEAD/H RNA helicase. (868 aa)
LBRM_07_0360Putative ATP-dependent DEAD/H RNA helicase. (602 aa)
LBRM_05_0360Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (630 aa)
LBRM_05_0140Putative nucleolar RNA helicase II. (689 aa)
LBRM_03_0590Uncharacterized protein. (2207 aa)
LBRM_01_0280Putative DNA excision/repair protein SNF2. (731 aa)
Your Current Organism:
Leishmania braziliensis
NCBI taxonomy Id: 5660
Other names: L. braziliensis, Leishmania (V.) braziliensis, Leishmania (Viannia) braziliensis, Leishmania brasiliensis, Leishmania viannia
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