STRINGSTRING
LMJF_27_2300 LMJF_27_2300 LMJF_27_1550 LMJF_27_1550 LMJF_29_0020 LMJF_29_0020 LMJF_29_0140 LMJF_29_0140 LMJF_29_2550 LMJF_29_2550 LMJF_35_2390 LMJF_35_2390 LMJF_35_2850 LMJF_35_2850 LMJF_36_3980 LMJF_36_3980 LMJF_33_3090 LMJF_33_3090 LMJF_33_2810 LMJF_33_2810 LMJF_33_0260 LMJF_33_0260 LMJF_32_1280 LMJF_32_1280 LMJF_32_0210 LMJF_32_0210 LMJF_31_0160 LMJF_31_0160 LMJF_28_0810 LMJF_28_0810 LMJF_28_0120 LMJF_28_0120 LMJF_22_0500 LMJF_22_0500 LMJF_20_0930 LMJF_20_0930 LMJF_20_0880 LMJF_20_0880
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LMJF_27_2300Transcription elongation regulator-like protein. (700 aa)
LMJF_27_1550DNA-directed RNA polymerase II-like protein. (134 aa)
LMJF_29_0020Transcription factor-like protein. (1045 aa)
LMJF_29_0140DNA-directed RNA polymerase I-like protein. (337 aa)
LMJF_29_2550Uncharacterized protein. (873 aa)
LMJF_35_2390Spt4 domain-containing protein. (152 aa)
LMJF_35_2850Uncharacterized protein. (555 aa)
LMJF_36_3980CDC73_C domain-containing protein. (363 aa)
LMJF_33_3090Uncharacterized protein. (1407 aa)
LMJF_33_2810Transcription elongation factor-like protein. (473 aa)
LMJF_33_0260Putative RNA-binding protein. (351 aa)
LMJF_32_1280Putative RNA polymerase-like protein. (199 aa)
LMJF_32_0210Rtt106 domain-containing protein. (544 aa)
LMJF_31_0160DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1185 aa)
LMJF_28_0810DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)
LMJF_28_0120Putative DNA-direcetd RNA polymerase II,subunit 9. (140 aa)
LMJF_22_0500Uncharacterized protein. (512 aa)
LMJF_20_0930Uncharacterized protein. (2092 aa)
LMJF_20_0880Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (220 aa)
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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