5 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LMJF_27_2300	Transcription elongation regulator-like protein. (700 aa)
	LMJF_27_1550	DNA-directed RNA polymerase II-like protein. (134 aa)
	LMJF_35_2390	Spt4 domain-containing protein. (152 aa)
	LMJF_35_2850	Uncharacterized protein. (555 aa)
	LMJF_32_1280	Putative RNA polymerase-like protein. (199 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMJF_27_1550	LMJF_27_2300	E9ADD4	E9ACU7	DNA-directed RNA polymerase II-like protein.	Transcription elongation regulator-like protein.	0.999
LMJF_27_1550	LMJF_32_1280	E9ADD4	Q4Q5F4	DNA-directed RNA polymerase II-like protein.	Putative RNA polymerase-like protein.	0.999
LMJF_27_1550	LMJF_35_2390	E9ADD4	E9AF63	DNA-directed RNA polymerase II-like protein.	Spt4 domain-containing protein.	0.999
LMJF_27_1550	LMJF_35_2850	E9ADD4	E9AFA9	DNA-directed RNA polymerase II-like protein.	Uncharacterized protein.	0.999
LMJF_27_2300	LMJF_27_1550	E9ACU7	E9ADD4	Transcription elongation regulator-like protein.	DNA-directed RNA polymerase II-like protein.	0.999
LMJF_27_2300	LMJF_32_1280	E9ACU7	Q4Q5F4	Transcription elongation regulator-like protein.	Putative RNA polymerase-like protein.	0.999
LMJF_27_2300	LMJF_35_2390	E9ACU7	E9AF63	Transcription elongation regulator-like protein.	Spt4 domain-containing protein.	0.999
LMJF_27_2300	LMJF_35_2850	E9ACU7	E9AFA9	Transcription elongation regulator-like protein.	Uncharacterized protein.	0.999
LMJF_32_1280	LMJF_27_1550	Q4Q5F4	E9ADD4	Putative RNA polymerase-like protein.	DNA-directed RNA polymerase II-like protein.	0.999
LMJF_32_1280	LMJF_27_2300	Q4Q5F4	E9ACU7	Putative RNA polymerase-like protein.	Transcription elongation regulator-like protein.	0.999
LMJF_32_1280	LMJF_35_2390	Q4Q5F4	E9AF63	Putative RNA polymerase-like protein.	Spt4 domain-containing protein.	0.999
LMJF_32_1280	LMJF_35_2850	Q4Q5F4	E9AFA9	Putative RNA polymerase-like protein.	Uncharacterized protein.	0.999
LMJF_35_2390	LMJF_27_1550	E9AF63	E9ADD4	Spt4 domain-containing protein.	DNA-directed RNA polymerase II-like protein.	0.999
LMJF_35_2390	LMJF_27_2300	E9AF63	E9ACU7	Spt4 domain-containing protein.	Transcription elongation regulator-like protein.	0.999
LMJF_35_2390	LMJF_32_1280	E9AF63	Q4Q5F4	Spt4 domain-containing protein.	Putative RNA polymerase-like protein.	0.999
LMJF_35_2390	LMJF_35_2850	E9AF63	E9AFA9	Spt4 domain-containing protein.	Uncharacterized protein.	0.999
LMJF_35_2850	LMJF_27_1550	E9AFA9	E9ADD4	Uncharacterized protein.	DNA-directed RNA polymerase II-like protein.	0.999
LMJF_35_2850	LMJF_27_2300	E9AFA9	E9ACU7	Uncharacterized protein.	Transcription elongation regulator-like protein.	0.999
LMJF_35_2850	LMJF_32_1280	E9AFA9	Q4Q5F4	Uncharacterized protein.	Putative RNA polymerase-like protein.	0.999
LMJF_35_2850	LMJF_35_2390	E9AFA9	E9AF63	Uncharacterized protein.	Spt4 domain-containing protein.	0.999