STRINGSTRING
LMJF_32_3460 LMJF_32_3460 LMJF_27_0450 LMJF_27_0450 LMJF_27_1980 LMJF_27_1980 LMJF_29_0540 LMJF_29_0540 LMJF_29_0550 LMJF_29_0550 LMJF_29_0560 LMJF_29_0560 LMJF_35_1090 LMJF_35_1090 LMJF_35_2990 LMJF_35_2990 LmjF22.0030 LmjF22.0030 LMJF_36_6400 LMJF_36_6400 LMJF_36_3000 LMJF_36_3000 LMJF_34_3080 LMJF_34_3080 LMJF_31_0200 LMJF_31_0200 LMJF_30_0620 LMJF_30_0620 LMJF_24_0810 LMJF_24_0810 LMJF_22_1580 LMJF_22_1580 LMJF_22_1380 LMJF_22_1380 LMJF_20_1360 LMJF_20_1360 LMJF_14_0010 LMJF_14_0010 LmjF11.0410 LmjF11.0410 LMJF_07_0580 LMJF_07_0580 P883.41 P883.41 LMJF_04_0120 LMJF_04_0120
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LMJF_32_3460Putative exosome-associated protein 2. (312 aa)
LMJF_27_0450Ribosome biogenesis protein. (330 aa)
LMJF_27_1980Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (924 aa)
LMJF_29_0540Exonuclease domain-containing protein. (502 aa)
LMJF_29_0550Exonuclease domain-containing protein. (880 aa)
LMJF_29_0560Exonuclease domain-containing protein. (405 aa)
LMJF_35_1090Kri1_C domain-containing protein. (1049 aa)
LMJF_35_2990Uncharacterized protein. (412 aa)
LmjF22.0030Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (671 aa)
LMJF_36_6400Putative 40S ribosomal protein S8. (260 aa)
LMJF_36_3000Putative ATP-dependent RNA helicase. (968 aa)
LMJF_34_3080Putative exosome subunit rrp6p homologue. (742 aa)
LMJF_31_0200WD_REPEATS_REGION domain-containing protein. (485 aa)
LMJF_30_0620Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (245 aa)
LMJF_24_0810Putative phosphotransferase. (582 aa)
LMJF_22_1580Putative exosome complex exonuclease RRP45. (363 aa)
LMJF_22_1380Protein MAK16 homolog; Belongs to the MAK16 family. (267 aa)
LMJF_20_1360RNasePH-like protein. (406 aa)
LMJF_14_0010Putative exosome complex exonuclease. (307 aa)
LmjF11.0410Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (808 aa)
LMJF_07_0580CLP1_P domain-containing protein. (1196 aa)
P883.41FtsJ-like methyltransferase. (335 aa)
LMJF_04_0120Putative exosome complex exonuclease RRP40. (300 aa)
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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