16 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LMJF_19_0660	Putative DNA-directed RNA polymerase,alpha subunit. (442 aa)
	LMJF_18_0790	Putative DNA-directed RNA polymerase II. (342 aa)
	LMJF_18_0780	Putative DNA-directed RNA polymerases II. (239 aa)
	LMJF_13_1120	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide. (89 aa)
	LMJF_09_1060	Putative DNA-directed RNA polymerase III subunit. (263 aa)
	LMJF_02_0680	Uncharacterized protein. (377 aa)
	LMJF_25_1315	DNA-directed RNA polymerase ii. (84 aa)
	LMJF_27_2600	Uncharacterized protein. (604 aa)
	LMJF_29_1320	Uncharacterized protein. (448 aa)
	LMJF_34_0890	Putative DNA-directed RNA polymerase subunit. (159 aa)
	LMJF_34_0360	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1582 aa)
	LMJF_28_2060	DNA-directed RNA polymerase-like protein. (137 aa)
	LMJF_28_0810	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)
	LMJF_25_0140	Uncharacterized protein. (129 aa)
	LMJF_20_0010	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
	LMJF_19_0420	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (151 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMJF_02_0680	LMJF_09_1060	E9ACE2	Q4QHR8	Uncharacterized protein.	Putative DNA-directed RNA polymerase III subunit.	0.983
LMJF_02_0680	LMJF_13_1120	E9ACE2	Q4QG42	Uncharacterized protein.	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	0.948
LMJF_02_0680	LMJF_18_0780	E9ACE2	Q4QDW4	Uncharacterized protein.	Putative DNA-directed RNA polymerases II.	0.963
LMJF_02_0680	LMJF_18_0790	E9ACE2	Q4QDW3	Uncharacterized protein.	Putative DNA-directed RNA polymerase II.	0.963
LMJF_02_0680	LMJF_19_0420	E9ACE2	Q4QDH9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.975
LMJF_02_0680	LMJF_19_0660	E9ACE2	Q4QDF5	Uncharacterized protein.	Putative DNA-directed RNA polymerase,alpha subunit.	0.984
LMJF_02_0680	LMJF_20_0010	E9ACE2	Q4QD43	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.981
LMJF_02_0680	LMJF_25_0140	E9ACE2	Q4QA82	Uncharacterized protein.	Uncharacterized protein.	0.952
LMJF_02_0680	LMJF_25_1315	E9ACE2	E9ACT0	Uncharacterized protein.	DNA-directed RNA polymerase ii.	0.948
LMJF_02_0680	LMJF_27_2600	E9ACE2	E9ACX1	Uncharacterized protein.	Uncharacterized protein.	0.540
LMJF_02_0680	LMJF_28_0810	E9ACE2	Q4Q8I8	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.980
LMJF_02_0680	LMJF_28_2060	E9ACE2	Q4Q860	Uncharacterized protein.	DNA-directed RNA polymerase-like protein.	0.975
LMJF_02_0680	LMJF_29_1320	E9ACE2	E9ADZ0	Uncharacterized protein.	Uncharacterized protein.	0.983
LMJF_02_0680	LMJF_34_0360	E9ACE2	Q4Q3H2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.985
LMJF_02_0680	LMJF_34_0890	E9ACE2	Q4Q3B6	Uncharacterized protein.	Putative DNA-directed RNA polymerase subunit.	0.952
LMJF_09_1060	LMJF_02_0680	Q4QHR8	E9ACE2	Putative DNA-directed RNA polymerase III subunit.	Uncharacterized protein.	0.983
LMJF_09_1060	LMJF_13_1120	Q4QHR8	Q4QG42	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	0.981
LMJF_09_1060	LMJF_18_0780	Q4QHR8	Q4QDW4	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerases II.	0.985
LMJF_09_1060	LMJF_18_0790	Q4QHR8	Q4QDW3	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerase II.	0.985
LMJF_09_1060	LMJF_19_0420	Q4QHR8	Q4QDH9	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.995