52 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LMJF_12_0560	Uncharacterized protein. (1369 aa)
	LMJF_09_1240	Uncharacterized protein. (2286 aa)
	LMJF_09_1060	Putative DNA-directed RNA polymerase III subunit. (263 aa)
	LMJF_05_0660	Nitroreductase-like protein. (323 aa)
	LMJF_21_1100	Tau95 domain-containing protein. (700 aa)
	LMJF_20_0930	Uncharacterized protein. (2092 aa)
	LMJF_20_0880	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (220 aa)
	LMJF_20_0010	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
	LMJF_19_1390	Transcription initiation factor-like protein (TFIID-like protein). (293 aa)
	LMJF_19_0660	Putative DNA-directed RNA polymerase,alpha subunit. (442 aa)
	LMJF_19_0420	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (151 aa)
	LMJF_23_0543	Putative 5'-3' exonuclease XRNC. (1068 aa)
	LMJF_24_0210	Putative transcription elongation factor. (333 aa)
	LMJF_24_0900	Uncharacterized protein. (1254 aa)
	LMJF_24_1150	Putative mitochondrial DNA-directed RNA polymerase. (1509 aa)
	LMJF_24_1680	VWFA domain-containing protein. (446 aa)
	LMJF_24_2280	Putative DNA excision repair protein. (813 aa)
	LMJF_25_0140	Uncharacterized protein. (129 aa)
	LMJF_25_0440	Putative transcription factor. (703 aa)
	LMJF_25_0620	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1616 aa)
	LMJF_28_0120	Putative DNA-direcetd RNA polymerase II,subunit 9. (140 aa)
	LMJF_28_0810	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)
	LMJF_28_2060	DNA-directed RNA polymerase-like protein. (137 aa)
	LMJF_31_0160	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1185 aa)
	LMJF_32_1280	Putative RNA polymerase-like protein. (199 aa)
	LMJF_32_3920	Putative DNA repair helicase. (806 aa)
	LMJF_33_0260	Putative RNA-binding protein. (351 aa)
	LMJF_33_2810	Transcription elongation factor-like protein. (473 aa)
	LMJF_33_2820	Uncharacterized protein. (593 aa)
	LMJF_33_3090	Uncharacterized protein. (1407 aa)
	LMJF_34_0360	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1582 aa)
	LMJF_34_0890	Putative DNA-directed RNA polymerase subunit. (159 aa)
	LMJF_36_1790	Putative exoribonuclease 2. (895 aa)
	LMJF_36_2500	Chromatin assembly factor 1 subunit b-like protein. (674 aa)
	LMJF_36_2640	Uncharacterized protein. (551 aa)
	LMJF_36_3980	CDC73_C domain-containing protein. (363 aa)
	LMJF_36_6530	SANT domain-containing protein. (397 aa)
	LMJF_35_4660	Putative small nuclear RNA gene activation protein (SNAP) 50. (430 aa)
	LMJF_29_1320	Uncharacterized protein. (448 aa)
	LMJF_29_0590	Putative DNA repair helicase. (1106 aa)
	LMJF_29_0140	DNA-directed RNA polymerase I-like protein. (337 aa)
	LMJF_29_0020	Transcription factor-like protein. (1045 aa)
	LMJF_27_1550	DNA-directed RNA polymerase II-like protein. (134 aa)
	LMJF_27_2600	Uncharacterized protein. (604 aa)
	LMJF_25_1315	DNA-directed RNA polymerase ii. (84 aa)
	LMJF_02_0680	Uncharacterized protein. (377 aa)
	LMJF_18_0790	Putative DNA-directed RNA polymerase II. (342 aa)
	LMJF_18_0780	Putative DNA-directed RNA polymerases II. (239 aa)
	LMJF_17_1150	Putative 5'-3' exonuclease. (1164 aa)
	LMJF_16_1350	Putative DNA-directed rna polymerase I largest subunit. (1809 aa)
	LMJF_14_0360	CW-type domain-containing protein. (1039 aa)
	LMJF_13_1120	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide. (89 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMJF_02_0680	LMJF_09_1060	E9ACE2	Q4QHR8	Uncharacterized protein.	Putative DNA-directed RNA polymerase III subunit.	0.983
LMJF_02_0680	LMJF_12_0560	E9ACE2	Q4QGN6	Uncharacterized protein.	Uncharacterized protein.	0.737
LMJF_02_0680	LMJF_13_1120	E9ACE2	Q4QG42	Uncharacterized protein.	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	0.948
LMJF_02_0680	LMJF_16_1350	E9ACE2	Q4QEN2	Uncharacterized protein.	Putative DNA-directed rna polymerase I largest subunit.	0.926
LMJF_02_0680	LMJF_18_0780	E9ACE2	Q4QDW4	Uncharacterized protein.	Putative DNA-directed RNA polymerases II.	0.963
LMJF_02_0680	LMJF_18_0790	E9ACE2	Q4QDW3	Uncharacterized protein.	Putative DNA-directed RNA polymerase II.	0.963
LMJF_02_0680	LMJF_19_0420	E9ACE2	Q4QDH9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.975
LMJF_02_0680	LMJF_19_0660	E9ACE2	Q4QDF5	Uncharacterized protein.	Putative DNA-directed RNA polymerase,alpha subunit.	0.984
LMJF_02_0680	LMJF_19_1390	E9ACE2	Q4QD71	Uncharacterized protein.	Transcription initiation factor-like protein (TFIID-like protein).	0.859
LMJF_02_0680	LMJF_20_0010	E9ACE2	Q4QD43	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.981
LMJF_02_0680	LMJF_21_1100	E9ACE2	Q4QC86	Uncharacterized protein.	Tau95 domain-containing protein.	0.700
LMJF_02_0680	LMJF_24_0210	E9ACE2	Q4QAW0	Uncharacterized protein.	Putative transcription elongation factor.	0.658
LMJF_02_0680	LMJF_25_0140	E9ACE2	Q4QA82	Uncharacterized protein.	Uncharacterized protein.	0.952
LMJF_02_0680	LMJF_25_0440	E9ACE2	Q4QA51	Uncharacterized protein.	Putative transcription factor.	0.873
LMJF_02_0680	LMJF_25_0620	E9ACE2	Q4QA33	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.897
LMJF_02_0680	LMJF_25_1315	E9ACE2	E9ACT0	Uncharacterized protein.	DNA-directed RNA polymerase ii.	0.948
LMJF_02_0680	LMJF_27_2600	E9ACE2	E9ACX1	Uncharacterized protein.	Uncharacterized protein.	0.540
LMJF_02_0680	LMJF_28_0120	E9ACE2	Q4Q8Q8	Uncharacterized protein.	Putative DNA-direcetd RNA polymerase II,subunit 9.	0.692
LMJF_02_0680	LMJF_28_0810	E9ACE2	Q4Q8I8	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.980
LMJF_02_0680	LMJF_28_2060	E9ACE2	Q4Q860	Uncharacterized protein.	DNA-directed RNA polymerase-like protein.	0.975