5 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LMJF_35_2390	Spt4 domain-containing protein. (152 aa)
	LMJF_29_0020	Transcription factor-like protein. (1045 aa)
	LMJF_36_3980	CDC73_C domain-containing protein. (363 aa)
	LMJF_33_3090	Uncharacterized protein. (1407 aa)
	LMJF_33_0260	Putative RNA-binding protein. (351 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMJF_29_0020	LMJF_33_0260	E9ADK4	Q4Q4J4	Transcription factor-like protein.	Putative RNA-binding protein.	0.952
LMJF_29_0020	LMJF_33_3090	E9ADK4	Q4Q3M7	Transcription factor-like protein.	Uncharacterized protein.	0.977
LMJF_29_0020	LMJF_35_2390	E9ADK4	E9AF63	Transcription factor-like protein.	Spt4 domain-containing protein.	0.994
LMJF_29_0020	LMJF_36_3980	E9ADK4	Q4Q117	Transcription factor-like protein.	CDC73_C domain-containing protein.	0.999
LMJF_33_0260	LMJF_29_0020	Q4Q4J4	E9ADK4	Putative RNA-binding protein.	Transcription factor-like protein.	0.952
LMJF_33_0260	LMJF_35_2390	Q4Q4J4	E9AF63	Putative RNA-binding protein.	Spt4 domain-containing protein.	0.877
LMJF_33_0260	LMJF_36_3980	Q4Q4J4	Q4Q117	Putative RNA-binding protein.	CDC73_C domain-containing protein.	0.843
LMJF_33_3090	LMJF_29_0020	Q4Q3M7	E9ADK4	Uncharacterized protein.	Transcription factor-like protein.	0.977
LMJF_33_3090	LMJF_35_2390	Q4Q3M7	E9AF63	Uncharacterized protein.	Spt4 domain-containing protein.	0.941
LMJF_33_3090	LMJF_36_3980	Q4Q3M7	Q4Q117	Uncharacterized protein.	CDC73_C domain-containing protein.	0.924
LMJF_35_2390	LMJF_29_0020	E9AF63	E9ADK4	Spt4 domain-containing protein.	Transcription factor-like protein.	0.994
LMJF_35_2390	LMJF_33_0260	E9AF63	Q4Q4J4	Spt4 domain-containing protein.	Putative RNA-binding protein.	0.877
LMJF_35_2390	LMJF_33_3090	E9AF63	Q4Q3M7	Spt4 domain-containing protein.	Uncharacterized protein.	0.941
LMJF_35_2390	LMJF_36_3980	E9AF63	Q4Q117	Spt4 domain-containing protein.	CDC73_C domain-containing protein.	0.974
LMJF_36_3980	LMJF_29_0020	Q4Q117	E9ADK4	CDC73_C domain-containing protein.	Transcription factor-like protein.	0.999
LMJF_36_3980	LMJF_33_0260	Q4Q117	Q4Q4J4	CDC73_C domain-containing protein.	Putative RNA-binding protein.	0.843
LMJF_36_3980	LMJF_33_3090	Q4Q117	Q4Q3M7	CDC73_C domain-containing protein.	Uncharacterized protein.	0.924
LMJF_36_3980	LMJF_35_2390	Q4Q117	E9AF63	CDC73_C domain-containing protein.	Spt4 domain-containing protein.	0.974