19 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LMJF_27_1550	DNA-directed RNA polymerase II-like protein. (134 aa)
	LMJF_29_0140	DNA-directed RNA polymerase I-like protein. (337 aa)
	LMJF_29_0590	Putative DNA repair helicase. (1106 aa)
	LMJF_29_2550	Uncharacterized protein. (873 aa)
	LMJF_35_2400	WD_REPEATS_REGION domain-containing protein. (1793 aa)
	LMJF_35_2850	Uncharacterized protein. (555 aa)
	LMJF_36_3980	CDC73_C domain-containing protein. (363 aa)
	LMJF_36_0800	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (626 aa)
	LMJF_36_0430	Uncharacterized protein. (290 aa)
	LMJF_32_3920	Putative DNA repair helicase. (806 aa)
	LMJF_32_0990	WD_REPEATS_REGION domain-containing protein. (1511 aa)
	LMJF_31_0070	Helicase-like protein. (950 aa)
	LMJF_28_0120	Putative DNA-direcetd RNA polymerase II,subunit 9. (140 aa)
	LMJF_26_0040	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (296 aa)
	LMJF_24_2280	Putative DNA excision repair protein. (813 aa)
	LMJF_24_1680	VWFA domain-containing protein. (446 aa)
	LMJF_20_0930	Uncharacterized protein. (2092 aa)
	LMJF_18_0470	WD_REPEATS_REGION domain-containing protein. (621 aa)
	LMJF_14_0360	CW-type domain-containing protein. (1039 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMJF_14_0360	LMJF_18_0470	Q4QFU9	Q4QDZ5	CW-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
LMJF_14_0360	LMJF_24_1680	Q4QFU9	Q4QAG3	CW-type domain-containing protein.	VWFA domain-containing protein.	0.834
LMJF_14_0360	LMJF_24_2280	Q4QFU9	Q4QAA2	CW-type domain-containing protein.	Putative DNA excision repair protein.	0.841
LMJF_14_0360	LMJF_26_0040	Q4QFU9	Q4Q9I7	CW-type domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.856
LMJF_14_0360	LMJF_27_1550	Q4QFU9	E9ADD4	CW-type domain-containing protein.	DNA-directed RNA polymerase II-like protein.	0.828
LMJF_14_0360	LMJF_28_0120	Q4QFU9	Q4Q8Q8	CW-type domain-containing protein.	Putative DNA-direcetd RNA polymerase II,subunit 9.	0.845
LMJF_14_0360	LMJF_29_0140	Q4QFU9	E9ADL6	CW-type domain-containing protein.	DNA-directed RNA polymerase I-like protein.	0.870
LMJF_14_0360	LMJF_29_0590	Q4QFU9	E9ADR1	CW-type domain-containing protein.	Putative DNA repair helicase.	0.730
LMJF_14_0360	LMJF_32_3920	Q4QFU9	Q4Q4N0	CW-type domain-containing protein.	Putative DNA repair helicase.	0.730
LMJF_14_0360	LMJF_36_0800	Q4QFU9	Q4Q1Z6	CW-type domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.832
LMJF_18_0470	LMJF_14_0360	Q4QDZ5	Q4QFU9	WD_REPEATS_REGION domain-containing protein.	CW-type domain-containing protein.	0.999
LMJF_18_0470	LMJF_24_1680	Q4QDZ5	Q4QAG3	WD_REPEATS_REGION domain-containing protein.	VWFA domain-containing protein.	0.835
LMJF_18_0470	LMJF_24_2280	Q4QDZ5	Q4QAA2	WD_REPEATS_REGION domain-containing protein.	Putative DNA excision repair protein.	0.841
LMJF_18_0470	LMJF_26_0040	Q4QDZ5	Q4Q9I7	WD_REPEATS_REGION domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.837
LMJF_18_0470	LMJF_27_1550	Q4QDZ5	E9ADD4	WD_REPEATS_REGION domain-containing protein.	DNA-directed RNA polymerase II-like protein.	0.827
LMJF_18_0470	LMJF_28_0120	Q4QDZ5	Q4Q8Q8	WD_REPEATS_REGION domain-containing protein.	Putative DNA-direcetd RNA polymerase II,subunit 9.	0.847
LMJF_18_0470	LMJF_29_0140	Q4QDZ5	E9ADL6	WD_REPEATS_REGION domain-containing protein.	DNA-directed RNA polymerase I-like protein.	0.877
LMJF_18_0470	LMJF_29_0590	Q4QDZ5	E9ADR1	WD_REPEATS_REGION domain-containing protein.	Putative DNA repair helicase.	0.730
LMJF_18_0470	LMJF_32_3920	Q4QDZ5	Q4Q4N0	WD_REPEATS_REGION domain-containing protein.	Putative DNA repair helicase.	0.730
LMJF_18_0470	LMJF_36_0800	Q4QDZ5	Q4Q1Z6	WD_REPEATS_REGION domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.831