15 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L8530.04	Uncharacterized protein L8530.04. (873 aa)
	LmjF11.0410	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (808 aa)
	LMJF_18_0830	Periodic tryptophan protein 2-like protein. (942 aa)
	LMJF_32_0690	Ribosomal_S4 domain-containing protein. (226 aa)
	LMJF_30_1290	Putative U3 small nuclear ribonucleoprotein (SnRNP). (288 aa)
	LMJF_18_1610	Uncharacterized protein. (654 aa)
	LMJF_18_0940	Uncharacterized protein. (1280 aa)
	LmjF22.0030	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (671 aa)
	LMJF_35_1990	Uncharacterized protein. (1062 aa)
	LMJF_29_0750	Putative U3 small nucleolar ribonucleoprotein protein MPP10. (677 aa)
	LMJF_02_0660	Uncharacterized protein. (930 aa)
	LMJF_36_4210	Uncharacterized protein. (976 aa)
	LMJF_36_4580	Uncharacterized protein. (452 aa)
	LMJF_14_0570	Uncharacterized protein. (1179 aa)
	LMJF_34_0740	CBF domain-containing protein. (468 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L8530.04	LMJF_02_0660	Q9GRN2	E9ACE0	Uncharacterized protein L8530.04.	Uncharacterized protein.	0.934
L8530.04	LMJF_18_0830	Q9GRN2	Q4QDV9	Uncharacterized protein L8530.04.	Periodic tryptophan protein 2-like protein.	0.987
L8530.04	LMJF_18_0940	Q9GRN2	Q4QDU8	Uncharacterized protein L8530.04.	Uncharacterized protein.	0.974
L8530.04	LMJF_18_1610	Q9GRN2	Q4QDM8	Uncharacterized protein L8530.04.	Uncharacterized protein.	0.762
L8530.04	LMJF_29_0750	Q9GRN2	E9ADS7	Uncharacterized protein L8530.04.	Putative U3 small nucleolar ribonucleoprotein protein MPP10.	0.938
L8530.04	LMJF_30_1290	Q9GRN2	Q4Q7H4	Uncharacterized protein L8530.04.	Putative U3 small nuclear ribonucleoprotein (SnRNP).	0.924
L8530.04	LMJF_32_0690	Q9GRN2	Q4Q5L4	Uncharacterized protein L8530.04.	Ribosomal_S4 domain-containing protein.	0.921
L8530.04	LMJF_34_0740	Q9GRN2	Q4Q3D2	Uncharacterized protein L8530.04.	CBF domain-containing protein.	0.948
L8530.04	LMJF_35_1990	Q9GRN2	E9AF21	Uncharacterized protein L8530.04.	Uncharacterized protein.	0.988
L8530.04	LMJF_36_4210	Q9GRN2	Q4Q0Z3	Uncharacterized protein L8530.04.	Uncharacterized protein.	0.988
L8530.04	LMJF_36_4580	Q9GRN2	Q4Q0V6	Uncharacterized protein L8530.04.	Uncharacterized protein.	0.990
L8530.04	LmjF11.0410	Q9GRN2	Q4QH39	Uncharacterized protein L8530.04.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.809
L8530.04	LmjF22.0030	Q9GRN2	O97209	Uncharacterized protein L8530.04.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.651
LMJF_02_0660	L8530.04	E9ACE0	Q9GRN2	Uncharacterized protein.	Uncharacterized protein L8530.04.	0.934
LMJF_02_0660	LMJF_14_0570	E9ACE0	Q4QFS8	Uncharacterized protein.	Uncharacterized protein.	0.968
LMJF_02_0660	LMJF_18_0830	E9ACE0	Q4QDV9	Uncharacterized protein.	Periodic tryptophan protein 2-like protein.	0.999
LMJF_02_0660	LMJF_18_0940	E9ACE0	Q4QDU8	Uncharacterized protein.	Uncharacterized protein.	0.999
LMJF_02_0660	LMJF_18_1610	E9ACE0	Q4QDM8	Uncharacterized protein.	Uncharacterized protein.	0.911
LMJF_02_0660	LMJF_29_0750	E9ACE0	E9ADS7	Uncharacterized protein.	Putative U3 small nucleolar ribonucleoprotein protein MPP10.	0.999
LMJF_02_0660	LMJF_30_1290	E9ACE0	Q4Q7H4	Uncharacterized protein.	Putative U3 small nuclear ribonucleoprotein (SnRNP).	0.989