38 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LMJF_02_0680	Uncharacterized protein. (377 aa)
	LMJF_03_0090	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (567 aa)
	LMJF_25_1315	DNA-directed RNA polymerase ii. (84 aa)
	LMJF_27_2600	Uncharacterized protein. (604 aa)
	LMJF_27_1550	DNA-directed RNA polymerase II-like protein. (134 aa)
	LMJF_29_0140	DNA-directed RNA polymerase I-like protein. (337 aa)
	LMJF_29_0590	Putative DNA repair helicase. (1106 aa)
	LMJF_29_1320	Uncharacterized protein. (448 aa)
	LMJF_29_2550	Uncharacterized protein. (873 aa)
	LMJF_35_2400	WD_REPEATS_REGION domain-containing protein. (1793 aa)
	LMJF_35_2850	Uncharacterized protein. (555 aa)
	LMJF_36_4145	Transcription factor S-II-like protein. (254 aa)
	LMJF_36_3980	CDC73_C domain-containing protein. (363 aa)
	LMJF_36_0800	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (626 aa)
	LMJF_36_0430	Uncharacterized protein. (290 aa)
	LMJF_34_0890	Putative DNA-directed RNA polymerase subunit. (159 aa)
	LMJF_32_3920	Putative DNA repair helicase. (806 aa)
	LMJF_32_1720	DNA_pol_E_B domain-containing protein. (726 aa)
	LMJF_32_0990	WD_REPEATS_REGION domain-containing protein. (1511 aa)
	LMJF_31_0070	Helicase-like protein. (950 aa)
	LMJF_28_2060	DNA-directed RNA polymerase-like protein. (137 aa)
	LMJF_28_0810	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa)
	LMJF_28_0120	Putative DNA-direcetd RNA polymerase II,subunit 9. (140 aa)
	LMJF_26_0040	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (296 aa)
	LMJF_25_0620	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1616 aa)
	LMJF_25_0140	Uncharacterized protein. (129 aa)
	LMJF_24_2280	Putative DNA excision repair protein. (813 aa)
	LMJF_24_1680	VWFA domain-containing protein. (446 aa)
	LMJF_22_0390	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (451 aa)
	LMJF_20_0930	Uncharacterized protein. (2092 aa)
	LMJF_19_0660	Putative DNA-directed RNA polymerase,alpha subunit. (442 aa)
	LMJF_18_0790	Putative DNA-directed RNA polymerase II. (342 aa)
	LMJF_18_0780	Putative DNA-directed RNA polymerases II. (239 aa)
	LMJF_18_0470	WD_REPEATS_REGION domain-containing protein. (621 aa)
	LMJF_16_1540	DNA polymerase. (1339 aa)
	LMJF_16_1350	Putative DNA-directed rna polymerase I largest subunit. (1809 aa)
	LMJF_14_0360	CW-type domain-containing protein. (1039 aa)
	LMJF_13_1120	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide. (89 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMJF_02_0680	LMJF_13_1120	E9ACE2	Q4QG42	Uncharacterized protein.	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	0.948
LMJF_02_0680	LMJF_16_1350	E9ACE2	Q4QEN2	Uncharacterized protein.	Putative DNA-directed rna polymerase I largest subunit.	0.926
LMJF_02_0680	LMJF_18_0780	E9ACE2	Q4QDW4	Uncharacterized protein.	Putative DNA-directed RNA polymerases II.	0.963
LMJF_02_0680	LMJF_18_0790	E9ACE2	Q4QDW3	Uncharacterized protein.	Putative DNA-directed RNA polymerase II.	0.963
LMJF_02_0680	LMJF_19_0660	E9ACE2	Q4QDF5	Uncharacterized protein.	Putative DNA-directed RNA polymerase,alpha subunit.	0.984
LMJF_02_0680	LMJF_25_0140	E9ACE2	Q4QA82	Uncharacterized protein.	Uncharacterized protein.	0.952
LMJF_02_0680	LMJF_25_0620	E9ACE2	Q4QA33	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.897
LMJF_02_0680	LMJF_25_1315	E9ACE2	E9ACT0	Uncharacterized protein.	DNA-directed RNA polymerase ii.	0.948
LMJF_02_0680	LMJF_27_2600	E9ACE2	E9ACX1	Uncharacterized protein.	Uncharacterized protein.	0.540
LMJF_02_0680	LMJF_28_0120	E9ACE2	Q4Q8Q8	Uncharacterized protein.	Putative DNA-direcetd RNA polymerase II,subunit 9.	0.692
LMJF_02_0680	LMJF_28_0810	E9ACE2	Q4Q8I8	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.980
LMJF_02_0680	LMJF_28_2060	E9ACE2	Q4Q860	Uncharacterized protein.	DNA-directed RNA polymerase-like protein.	0.975
LMJF_02_0680	LMJF_29_0140	E9ACE2	E9ADL6	Uncharacterized protein.	DNA-directed RNA polymerase I-like protein.	0.920
LMJF_02_0680	LMJF_29_1320	E9ACE2	E9ADZ0	Uncharacterized protein.	Uncharacterized protein.	0.983
LMJF_02_0680	LMJF_34_0890	E9ACE2	Q4Q3B6	Uncharacterized protein.	Putative DNA-directed RNA polymerase subunit.	0.952
LMJF_03_0090	LMJF_16_1540	E9ACF6	Q4QEL1	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	DNA polymerase.	0.999
LMJF_03_0090	LMJF_22_0390	E9ACF6	Q4QBV6	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.999
LMJF_03_0090	LMJF_32_1720	E9ACF6	Q4Q5A8	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.	DNA_pol_E_B domain-containing protein.	0.999
LMJF_13_1120	LMJF_02_0680	Q4QG42	E9ACE2	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	Uncharacterized protein.	0.948
LMJF_13_1120	LMJF_14_0360	Q4QG42	Q4QFU9	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	CW-type domain-containing protein.	0.728