19 items (Leishmania major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPOIILS	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1662 aa)
	LMJF_34_0890	Putative DNA-directed RNA polymerase subunit. (159 aa)
	LMJF_29_0140	DNA-directed RNA polymerase I-like protein. (337 aa)
	LMJF_27_1550	DNA-directed RNA polymerase II-like protein. (134 aa)
	LMJF_25_1315	DNA-directed RNA polymerase ii. (84 aa)
	LMJF_09_1060	Putative DNA-directed RNA polymerase III subunit. (263 aa)
	LMJF_13_1120	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide. (89 aa)
	LMJF_16_1350	Putative DNA-directed rna polymerase I largest subunit. (1809 aa)
	LMJF_18_0780	Putative DNA-directed RNA polymerases II. (239 aa)
	LMJF_18_0790	Putative DNA-directed RNA polymerase II. (342 aa)
	LMJF_19_0420	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (151 aa)
	LMJF_19_0660	Putative DNA-directed RNA polymerase,alpha subunit. (442 aa)
	LMJF_20_0010	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
	LMJF_22_0390	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (451 aa)
	LMJF_24_1150	Putative mitochondrial DNA-directed RNA polymerase. (1509 aa)
	LMJF_25_0620	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1616 aa)
	LMJF_28_2060	DNA-directed RNA polymerase-like protein. (137 aa)
	LMJF_31_0160	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1185 aa)
	LMJF_34_0360	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1582 aa)

Your Current Organism:

Leishmania major

NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMJF_09_1060	LMJF_13_1120	Q4QHR8	Q4QG42	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	0.981
LMJF_09_1060	LMJF_16_1350	Q4QHR8	Q4QEN2	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed rna polymerase I largest subunit.	0.967
LMJF_09_1060	LMJF_18_0780	Q4QHR8	Q4QDW4	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerases II.	0.985
LMJF_09_1060	LMJF_18_0790	Q4QHR8	Q4QDW3	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerase II.	0.985
LMJF_09_1060	LMJF_19_0420	Q4QHR8	Q4QDH9	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.995
LMJF_09_1060	LMJF_19_0660	Q4QHR8	Q4QDF5	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerase,alpha subunit.	0.999
LMJF_09_1060	LMJF_20_0010	Q4QHR8	Q4QD43	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LMJF_09_1060	LMJF_25_0620	Q4QHR8	Q4QA33	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
LMJF_09_1060	LMJF_25_1315	Q4QHR8	E9ACT0	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase ii.	0.981
LMJF_09_1060	LMJF_27_1550	Q4QHR8	E9ADD4	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase II-like protein.	0.481
LMJF_09_1060	LMJF_28_2060	Q4QHR8	Q4Q860	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase-like protein.	0.999
LMJF_09_1060	LMJF_29_0140	Q4QHR8	E9ADL6	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase I-like protein.	0.970
LMJF_09_1060	LMJF_31_0160	Q4QHR8	Q4Q6P8	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.944
LMJF_09_1060	LMJF_34_0360	Q4QHR8	Q4Q3H2	Putative DNA-directed RNA polymerase III subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LMJF_09_1060	LMJF_34_0890	Q4QHR8	Q4Q3B6	Putative DNA-directed RNA polymerase III subunit.	Putative DNA-directed RNA polymerase subunit.	0.981
LMJF_13_1120	LMJF_09_1060	Q4QG42	Q4QHR8	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	Putative DNA-directed RNA polymerase III subunit.	0.981
LMJF_13_1120	LMJF_16_1350	Q4QG42	Q4QEN2	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	Putative DNA-directed rna polymerase I largest subunit.	0.978
LMJF_13_1120	LMJF_18_0780	Q4QG42	Q4QDW4	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	Putative DNA-directed RNA polymerases II.	0.976
LMJF_13_1120	LMJF_18_0790	Q4QG42	Q4QDW3	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	Putative DNA-directed RNA polymerase II.	0.976
LMJF_13_1120	LMJF_19_0420	Q4QG42	Q4QDH9	Putative DNA-directed RNA polymerase ii 8.2 Kdpolypeptide.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.979