(23 nodes) Copper amine oxidase, and Acetate biosynthetic process network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2SMM8	Pyr_redox_2 domain-containing protein. (316 aa)
	A0A2L2SUM8	Uncharacterized protein. (340 aa)
	A0A2L2SZW5	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (501 aa)
	A0A2L2T1W3	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (505 aa)
	A0A2L2T5U2	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (500 aa)
	A0A2L2T8R5	Aldedh domain-containing protein. (495 aa)
	A0A2L2TAM3	NAD_binding_2 domain-containing protein. (296 aa)
	A0A2L2TAX0	Uncharacterized protein. (702 aa)
	A0A2L2TBQ1	Amine oxidase. (683 aa)
	A0A2L2TD64	Aldedh domain-containing protein. (142 aa)
	A0A2L2TD68	Amino_oxidase domain-containing protein. (530 aa)
	A0A2L2TEP3	Uncharacterized protein. (495 aa)
	A0A2L2TG09	Amine oxidase. (735 aa)
	A0A2L2TGT7	Aldedh domain-containing protein. (492 aa)
	A0A2L2TIW0	Amine oxidase. (784 aa)
	A0A2L2TJN7	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (482 aa)
	A0A2L2TN75	Amine oxidase. (673 aa)
	A0A2L2TNY0	Probable acetate kinase. (415 aa)
	A0A2L2TRN0	Amine oxidase. (683 aa)
	A0A2L2TWP1	Amine oxidase. (701 aa)
	A0A2L2TWX6	Amine oxidase. (682 aa)
	A0A2L2TYX6	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (490 aa)
	A0A2L2U177	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (333 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SMM8	A0A2L2SUM8	Pyr_redox_2 domain-containing protein.	Uncharacterized protein.	0.777
A0A2L2SMM8	A0A2L2SZW5	Pyr_redox_2 domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.422
A0A2L2SMM8	A0A2L2T1W3	Pyr_redox_2 domain-containing protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.580
A0A2L2SMM8	A0A2L2T5U2	Pyr_redox_2 domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.422
A0A2L2SMM8	A0A2L2T8R5	Pyr_redox_2 domain-containing protein.	Aldedh domain-containing protein.	0.422
A0A2L2SMM8	A0A2L2TAM3	Pyr_redox_2 domain-containing protein.	NAD_binding_2 domain-containing protein.	0.777
A0A2L2SMM8	A0A2L2TAX0	Pyr_redox_2 domain-containing protein.	Uncharacterized protein.	0.536
A0A2L2SMM8	A0A2L2TD64	Pyr_redox_2 domain-containing protein.	Aldedh domain-containing protein.	0.422
A0A2L2SMM8	A0A2L2TGT7	Pyr_redox_2 domain-containing protein.	Aldedh domain-containing protein.	0.422
A0A2L2SMM8	A0A2L2TJN7	Pyr_redox_2 domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.422
A0A2L2SMM8	A0A2L2TYX6	Pyr_redox_2 domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.422
A0A2L2SMM8	A0A2L2U177	Pyr_redox_2 domain-containing protein.	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	0.777
A0A2L2SUM8	A0A2L2SMM8	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.777
A0A2L2SUM8	A0A2L2SZW5	Uncharacterized protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.777
A0A2L2SUM8	A0A2L2T1W3	Uncharacterized protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.941
A0A2L2SUM8	A0A2L2T5U2	Uncharacterized protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.784
A0A2L2SUM8	A0A2L2T8R5	Uncharacterized protein.	Aldedh domain-containing protein.	0.784
A0A2L2SUM8	A0A2L2TAX0	Uncharacterized protein.	Uncharacterized protein.	0.715
A0A2L2SUM8	A0A2L2TD64	Uncharacterized protein.	Aldedh domain-containing protein.	0.633
A0A2L2SUM8	A0A2L2TGT7	Uncharacterized protein.	Aldedh domain-containing protein.	0.784