(40 nodes) Kinetochore, and MAPK targets/ Nuclear events mediated by MAP kinases network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2SPQ8	BZIP domain-containing protein. (330 aa)
	A0A2L2SS52	Uncharacterized protein. (427 aa)
	A0A2L2SSB0	BZIP domain-containing protein. (292 aa)
	A0A2L2STS8	APH domain-containing protein. (125 aa)
	A0A2L2SU19	DSPc domain-containing protein. (314 aa)
	A0A2L2SVS6	Uncharacterized protein. (302 aa)
	A0A2L2SY82	Uncharacterized protein. (474 aa)
	A0A2L2SYK8	Ig-like domain-containing protein. (448 aa)
	A0A2L2SZ86	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family. (529 aa)
	A0A2L2T1R4	Uncharacterized protein. (366 aa)
	A0A2L2T4B8	Uncharacterized protein. (204 aa)
	A0A2L2T4L1	Uncharacterized protein. (415 aa)
	A0A2L2T8Y7	Uncharacterized protein. (172 aa)
	A0A2L2TA60	BZIP domain-containing protein. (297 aa)
	A0A2L2TAJ4	Uncharacterized protein. (545 aa)
	A0A2L2TAT2	Uncharacterized protein. (195 aa)
	A0A2L2TC51	Uncharacterized protein. (697 aa)
	A0A2L2TE36	Uncharacterized protein. (642 aa)
	A0A2L2TEH9	Uncharacterized protein. (186 aa)
	A0A2L2TEW9	Uncharacterized protein. (106 aa)
	A0A2L2TG94	Uncharacterized protein. (642 aa)
	A0A2L2TI34	BZIP domain-containing protein. (190 aa)
	A0A2L2TIR8	Uncharacterized protein. (134 aa)
	A0A2L2TIS0	Uncharacterized protein. (91 aa)
	A0A2L2TIV2	Spc7 domain-containing protein. (1468 aa)
	A0A2L2TJD1	Uncharacterized protein. (211 aa)
	A0A2L2TKB2	Uncharacterized protein. (727 aa)
	A0A2L2TLH2	Uncharacterized protein. (507 aa)
	A0A2L2TNS7	Uncharacterized protein. (222 aa)
	A0A2L2TPG4	BZIP domain-containing protein. (320 aa)
	A0A2L2TPI7	Uncharacterized protein. (257 aa)
	A0A2L2TQZ5	Uncharacterized protein. (583 aa)
	A0A2L2TV33	Uncharacterized protein. (143 aa)
	A0A2L2TWJ5	Uncharacterized protein. (201 aa)
	A0A2L2TWL3	DHR10 domain-containing protein. (462 aa)
	A0A2L2TWQ9	Uncharacterized protein. (657 aa)
	A0A2L2U319	Uncharacterized protein. (201 aa)
	A0A2L2U472	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (172 aa)
	A0A2L2U4E8	Uncharacterized protein. (72 aa)
	A0A2L2U4Y3	Uncharacterized protein. (573 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SPQ8	A0A2L2STS8	BZIP domain-containing protein.	APH domain-containing protein.	0.604
A0A2L2SPQ8	A0A2L2TE36	BZIP domain-containing protein.	Uncharacterized protein.	0.604
A0A2L2SPQ8	A0A2L2TKB2	BZIP domain-containing protein.	Uncharacterized protein.	0.723
A0A2L2SPQ8	A0A2L2TNS7	BZIP domain-containing protein.	Uncharacterized protein.	0.533
A0A2L2SPQ8	A0A2L2TPI7	BZIP domain-containing protein.	Uncharacterized protein.	0.733
A0A2L2SPQ8	A0A2L2TQZ5	BZIP domain-containing protein.	Uncharacterized protein.	0.604
A0A2L2SPQ8	A0A2L2TWJ5	BZIP domain-containing protein.	Uncharacterized protein.	0.401
A0A2L2SPQ8	A0A2L2TWL3	BZIP domain-containing protein.	DHR10 domain-containing protein.	0.732
A0A2L2SPQ8	A0A2L2U4Y3	BZIP domain-containing protein.	Uncharacterized protein.	0.604
A0A2L2SS52	A0A2L2STS8	Uncharacterized protein.	APH domain-containing protein.	0.604
A0A2L2SS52	A0A2L2TE36	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A2L2SS52	A0A2L2TKB2	Uncharacterized protein.	Uncharacterized protein.	0.723
A0A2L2SS52	A0A2L2TNS7	Uncharacterized protein.	Uncharacterized protein.	0.533
A0A2L2SS52	A0A2L2TPI7	Uncharacterized protein.	Uncharacterized protein.	0.733
A0A2L2SS52	A0A2L2TQZ5	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A2L2SS52	A0A2L2TWJ5	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A2L2SS52	A0A2L2TWL3	Uncharacterized protein.	DHR10 domain-containing protein.	0.732
A0A2L2SS52	A0A2L2U4Y3	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A2L2SSB0	A0A2L2STS8	BZIP domain-containing protein.	APH domain-containing protein.	0.604
A0A2L2SSB0	A0A2L2TE36	BZIP domain-containing protein.	Uncharacterized protein.	0.604