(13 nodes) Cytosolic large ribosomal subunit network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2T534	Uncharacterized protein. (76 aa)
	A0A2L2T5Y0	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (258 aa)
	A0A2L2T6M3	Uncharacterized protein. (248 aa)
	A0A2L2T7L4	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	A0A2L2T8U9	Ribosomal_L23eN domain-containing protein. (173 aa)
	A0A2L2TA08	Uncharacterized protein. (124 aa)
	A0A2L2TFN9	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)
	A0A2L2TJ82	KOW domain-containing protein. (136 aa)
	A0A2L2TM68	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (226 aa)
	A0A2L2TNG9	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	A0A2L2TX49	Ribosomal_L28e domain-containing protein. (161 aa)
	A0A2L2TY07	Ribosomal_L18_c domain-containing protein. (322 aa)
	A0A2L2U1Y1	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (78 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2T534	A0A2L2T5Y0	Uncharacterized protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
A0A2L2T534	A0A2L2T6M3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2L2T534	A0A2L2T7L4	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
A0A2L2T534	A0A2L2T8U9	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein.	0.999
A0A2L2T534	A0A2L2TA08	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2L2T534	A0A2L2TFN9	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
A0A2L2T534	A0A2L2TJ82	Uncharacterized protein.	KOW domain-containing protein.	0.999
A0A2L2T534	A0A2L2TM68	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
A0A2L2T534	A0A2L2TNG9	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
A0A2L2T534	A0A2L2TX49	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.999
A0A2L2T534	A0A2L2TY07	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.999
A0A2L2T534	A0A2L2U1Y1	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
A0A2L2T5Y0	A0A2L2T534	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	Uncharacterized protein.	0.999
A0A2L2T5Y0	A0A2L2T6M3	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	Uncharacterized protein.	0.999
A0A2L2T5Y0	A0A2L2T7L4	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
A0A2L2T5Y0	A0A2L2T8U9	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	Ribosomal_L23eN domain-containing protein.	0.999
A0A2L2T5Y0	A0A2L2TA08	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	Uncharacterized protein.	0.999
A0A2L2T5Y0	A0A2L2TFN9	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
A0A2L2T5Y0	A0A2L2TJ82	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	KOW domain-containing protein.	0.999
A0A2L2T5Y0	A0A2L2TM68	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999