(9 nodes) Cytosolic large ribosomal subunit network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2STS5	Ribosomal_L14e domain-containing protein. (147 aa)
	A0A2L2SW09	Ribosomal_L7Ae domain-containing protein. (261 aa)
	A0A2L2T0J8	Uncharacterized protein. (160 aa)
	A0A2L2T593	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	A0A2L2THX7	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
	A0A2L2TIR4	Uncharacterized protein. (123 aa)
	A0A2L2TL87	Uncharacterized protein. (160 aa)
	A0A2L2TNI9	Uncharacterized protein. (193 aa)
	A0A2L2U0D2	Ribosomal_L16 domain-containing protein. (221 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2STS5	A0A2L2SW09	Ribosomal_L14e domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A2L2STS5	A0A2L2T0J8	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2STS5	A0A2L2T593	Ribosomal_L14e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.999
A0A2L2STS5	A0A2L2THX7	Ribosomal_L14e domain-containing protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
A0A2L2STS5	A0A2L2TIR4	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2STS5	A0A2L2TL87	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2STS5	A0A2L2TNI9	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2STS5	A0A2L2U0D2	Ribosomal_L14e domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.999
A0A2L2SW09	A0A2L2STS5	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.999
A0A2L2SW09	A0A2L2T0J8	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2SW09	A0A2L2T593	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.999
A0A2L2SW09	A0A2L2THX7	Ribosomal_L7Ae domain-containing protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
A0A2L2SW09	A0A2L2TIR4	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2SW09	A0A2L2TL87	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2SW09	A0A2L2TNI9	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2SW09	A0A2L2U0D2	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.999
A0A2L2T0J8	A0A2L2STS5	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.999
A0A2L2T0J8	A0A2L2SW09	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A2L2T0J8	A0A2L2T593	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.999
A0A2L2T0J8	A0A2L2THX7	Uncharacterized protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999