(9 nodes) Cytosolic large ribosomal subunit network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2T3K7	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	A0A2L2T4X1	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (173 aa)
	A0A2L2TBN4	Uncharacterized protein. (131 aa)
	A0A2L2TEU4	Uncharacterized protein. (182 aa)
	A0A2L2TJE0	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	A0A2L2TJZ0	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (199 aa)
	A0A2L2TPU0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (204 aa)
	A0A2L2TSG6	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (188 aa)
	A0A2L2TWU1	Uncharacterized protein. (109 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2T3K7	A0A2L2T4X1	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
A0A2L2T3K7	A0A2L2TBN4	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Uncharacterized protein.	0.999
A0A2L2T3K7	A0A2L2TEU4	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Uncharacterized protein.	0.999
A0A2L2T3K7	A0A2L2TJE0	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
A0A2L2T3K7	A0A2L2TJZ0	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
A0A2L2T3K7	A0A2L2TPU0	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A2L2T3K7	A0A2L2TSG6	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
A0A2L2T3K7	A0A2L2TWU1	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Uncharacterized protein.	0.999
A0A2L2T4X1	A0A2L2T3K7	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
A0A2L2T4X1	A0A2L2TBN4	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein.	0.999
A0A2L2T4X1	A0A2L2TEU4	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein.	0.999
A0A2L2T4X1	A0A2L2TJE0	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
A0A2L2T4X1	A0A2L2TJZ0	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
A0A2L2T4X1	A0A2L2TPU0	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A2L2T4X1	A0A2L2TSG6	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
A0A2L2T4X1	A0A2L2TWU1	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein.	0.999
A0A2L2TBN4	A0A2L2T3K7	Uncharacterized protein.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
A0A2L2TBN4	A0A2L2T4X1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
A0A2L2TBN4	A0A2L2TEU4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2L2TBN4	A0A2L2TJE0	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999