(21 nodes) SCF ubiquitin ligase complex network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2TVR2	Uncharacterized protein. (620 aa)
	A0A2L2TYY1	Uncharacterized protein. (962 aa)
	A0A2L2SNE9	F-box domain-containing protein. (693 aa)
	A0A2L2ST95	Uncharacterized protein. (712 aa)
	A0A2L2SXW5	MARVEL domain-containing protein. (246 aa)
	A0A2L2SYT9	Cullin domain-containing protein; Belongs to the cullin family. (246 aa)
	A0A2L2T1Q1	Uncharacterized protein. (992 aa)
	A0A2L2T2P8	CULLIN_2 domain-containing protein; Belongs to the cullin family. (750 aa)
	A0A2L2U3A0	Uncharacterized protein. (201 aa)
	A0A2L2T6H3	RING-type domain-containing protein. (115 aa)
	A0A2L2T8K0	Uncharacterized protein. (1030 aa)
	A0A2L2TCI6	Uncharacterized protein. (673 aa)
	A0A2L2TDS2	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (114 aa)
	A0A2L2TE02	Uncharacterized protein. (754 aa)
	A0A2L2TGR6	F-box domain-containing protein. (545 aa)
	A0A2L2TIZ9	WD_REPEATS_REGION domain-containing protein. (974 aa)
	A0A2L2TMC9	Uncharacterized protein. (492 aa)
	A0A2L2TMT0	F-box domain-containing protein. (741 aa)
	A0A2L2TPC5	Uncharacterized protein. (423 aa)
	A0A2L2TPX0	Uncharacterized protein. (700 aa)
	A0A2L2TSA4	UBIQUITIN_CONJUGAT_2 domain-containing protein. (224 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SNE9	A0A2L2SYT9	F-box domain-containing protein.	Cullin domain-containing protein; Belongs to the cullin family.	0.735
A0A2L2SNE9	A0A2L2T2P8	F-box domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.735
A0A2L2SNE9	A0A2L2T6H3	F-box domain-containing protein.	RING-type domain-containing protein.	0.686
A0A2L2SNE9	A0A2L2T8K0	F-box domain-containing protein.	Uncharacterized protein.	0.435
A0A2L2SNE9	A0A2L2TCI6	F-box domain-containing protein.	Uncharacterized protein.	0.435
A0A2L2SNE9	A0A2L2TGR6	F-box domain-containing protein.	F-box domain-containing protein.	0.522
A0A2L2SNE9	A0A2L2U3A0	F-box domain-containing protein.	Uncharacterized protein.	0.735
A0A2L2ST95	A0A2L2SYT9	Uncharacterized protein.	Cullin domain-containing protein; Belongs to the cullin family.	0.856
A0A2L2ST95	A0A2L2T1Q1	Uncharacterized protein.	Uncharacterized protein.	0.586
A0A2L2ST95	A0A2L2T2P8	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.856
A0A2L2ST95	A0A2L2T6H3	Uncharacterized protein.	RING-type domain-containing protein.	0.969
A0A2L2ST95	A0A2L2T8K0	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A2L2ST95	A0A2L2TCI6	Uncharacterized protein.	Uncharacterized protein.	0.929
A0A2L2ST95	A0A2L2TE02	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A2L2ST95	A0A2L2TMT0	Uncharacterized protein.	F-box domain-containing protein.	0.715
A0A2L2ST95	A0A2L2TSA4	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.775
A0A2L2ST95	A0A2L2U3A0	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2L2SYT9	A0A2L2SNE9	Cullin domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.735
A0A2L2SYT9	A0A2L2ST95	Cullin domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.856
A0A2L2SYT9	A0A2L2T1Q1	Cullin domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.854