(23 nodes) Regulation of mitotic metaphase/anaphase transition network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2T7V3	Uncharacterized protein. (80 aa)
	A0A2L2TCM0	Uncharacterized protein. (623 aa)
	A0A2L2TEL3	Uncharacterized protein. (597 aa)
	A0A2L2TFA7	Uncharacterized protein. (841 aa)
	A0A2L2TG82	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (308 aa)
	A0A2L2THN4	Uncharacterized protein. (616 aa)
	A0A2L2TI38	Uncharacterized protein. (348 aa)
	A0A2L2TIV2	Spc7 domain-containing protein. (1468 aa)
	A0A2L2TJJ8	Uncharacterized protein. (311 aa)
	A0A2L2T7U1	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family. (523 aa)
	A0A2L2T644	Uncharacterized protein. (1218 aa)
	A0A2L2T3J7	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (177 aa)
	A0A2L2T0Q7	ANK_REP_REGION domain-containing protein. (532 aa)
	A0A2L2SUI3	Uncharacterized protein. (786 aa)
	A0A2L2TKB1	Protein kinase domain-containing protein. (885 aa)
	A0A2L2TKN1	Protein kinase domain-containing protein. (976 aa)
	A0A2L2TSH4	Uncharacterized protein. (770 aa)
	A0A2L2TSV5	Uncharacterized protein. (855 aa)
	A0A2L2TU51	TPR_REGION domain-containing protein. (374 aa)
	A0A2L2TWQ9	Uncharacterized protein. (657 aa)
	A0A2L2TXA1	Uncharacterized protein. (63 aa)
	A0A2L2TXF0	HORMA domain-containing protein. (231 aa)
	A0A2L2SPW1	TPR_REGION domain-containing protein. (666 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SPW1	A0A2L2SUI3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999
A0A2L2SPW1	A0A2L2T3J7	TPR_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.983
A0A2L2SPW1	A0A2L2T644	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.991
A0A2L2SPW1	A0A2L2TFA7	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.998
A0A2L2SPW1	A0A2L2THN4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.998
A0A2L2SPW1	A0A2L2TI38	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.948
A0A2L2SPW1	A0A2L2TKN1	TPR_REGION domain-containing protein.	Protein kinase domain-containing protein.	0.893
A0A2L2SPW1	A0A2L2TSH4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.918
A0A2L2SPW1	A0A2L2TXA1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.995
A0A2L2SPW1	A0A2L2TXF0	TPR_REGION domain-containing protein.	HORMA domain-containing protein.	0.993
A0A2L2SUI3	A0A2L2SPW1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
A0A2L2SUI3	A0A2L2T3J7	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.982
A0A2L2SUI3	A0A2L2T644	Uncharacterized protein.	Uncharacterized protein.	0.981
A0A2L2SUI3	A0A2L2TFA7	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A2L2SUI3	A0A2L2TG82	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.501
A0A2L2SUI3	A0A2L2THN4	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A2L2SUI3	A0A2L2TI38	Uncharacterized protein.	Uncharacterized protein.	0.937
A0A2L2SUI3	A0A2L2TKN1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.747
A0A2L2SUI3	A0A2L2TSH4	Uncharacterized protein.	Uncharacterized protein.	0.907
A0A2L2SUI3	A0A2L2TXA1	Uncharacterized protein.	Uncharacterized protein.	0.989