(18 nodes) Maintenance of protein location in cell network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2SNY9	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (215 aa)
	A0A2L2T681	Uncharacterized protein. (349 aa)
	A0A2L2U3C6	Uncharacterized protein. (213 aa)
	A0A2L2TUN7	PHD domain-containing protein. (715 aa)
	A0A2L2TYZ8	Vacuolar protein sorting-associated protein; May be involved in recycling of membrane proteins between an endocytic compartment and the TGN; Belongs to the VPS13 family. (3211 aa)
	A0A2L2SXR2	Uncharacterized protein. (271 aa)
	A0A2L2T206	EXS domain-containing protein. (405 aa)
	A0A2L2TL98	PH domain-containing protein. (1863 aa)
	A0A2L2TM80	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (902 aa)
	A0A2L2T296	GOLD domain-containing protein. (203 aa)
	A0A2L2T510	PX domain-containing protein. (558 aa)
	A0A2L2T5M7	Uncharacterized protein. (981 aa)
	A0A2L2TDY0	Uncharacterized protein. (332 aa)
	A0A2L2TIN5	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. (131 aa)
	A0A2L2TIU2	Uncharacterized protein. (349 aa)
	A0A2L2T632	Uncharacterized protein. (378 aa)
	A0A2L2SNS4	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (695 aa)
	A0A2L2T6F9	ER lumen protein-retaining receptor. (215 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SNS4	A0A2L2T510	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	PX domain-containing protein.	0.723
A0A2L2SNS4	A0A2L2TL98	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	PH domain-containing protein.	0.616
A0A2L2SNY9	A0A2L2T296	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	GOLD domain-containing protein.	0.578
A0A2L2SNY9	A0A2L2T681	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	Uncharacterized protein.	0.436
A0A2L2SNY9	A0A2L2T6F9	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	ER lumen protein-retaining receptor.	0.530
A0A2L2SXR2	A0A2L2TM80	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.400
A0A2L2T206	A0A2L2T6F9	EXS domain-containing protein.	ER lumen protein-retaining receptor.	0.435
A0A2L2T296	A0A2L2SNY9	GOLD domain-containing protein.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.578
A0A2L2T296	A0A2L2T681	GOLD domain-containing protein.	Uncharacterized protein.	0.749
A0A2L2T296	A0A2L2T6F9	GOLD domain-containing protein.	ER lumen protein-retaining receptor.	0.776
A0A2L2T296	A0A2L2TL98	GOLD domain-containing protein.	PH domain-containing protein.	0.541
A0A2L2T510	A0A2L2SNS4	PX domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.723
A0A2L2T510	A0A2L2TM80	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.975
A0A2L2T681	A0A2L2SNY9	Uncharacterized protein.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.436
A0A2L2T681	A0A2L2T296	Uncharacterized protein.	GOLD domain-containing protein.	0.749
A0A2L2T6F9	A0A2L2SNY9	ER lumen protein-retaining receptor.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.530
A0A2L2T6F9	A0A2L2T206	ER lumen protein-retaining receptor.	EXS domain-containing protein.	0.435
A0A2L2T6F9	A0A2L2T296	ER lumen protein-retaining receptor.	GOLD domain-containing protein.	0.776
A0A2L2TDY0	A0A2L2TIN5	Uncharacterized protein.	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	0.613
A0A2L2TIN5	A0A2L2TDY0	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	Uncharacterized protein.	0.613