(7 nodes) Microtubule plus-end network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2SMV6	Uncharacterized protein. (240 aa)
	A0A2L2SN66	CAP-Gly domain-containing protein. (835 aa)
	A0A2L2T544	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (817 aa)
	A0A2L2TGG4	CAP-Gly domain-containing protein. (1343 aa)
	A0A2L2TKE2	Uncharacterized protein. (291 aa)
	A0A2L2TSB9	CAP-Gly domain-containing protein. (242 aa)
	A0A2L2TW86	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (958 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SMV6	A0A2L2SN66	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.950
A0A2L2SMV6	A0A2L2T544	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.808
A0A2L2SMV6	A0A2L2TGG4	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.898
A0A2L2SMV6	A0A2L2TKE2	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A2L2SMV6	A0A2L2TW86	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.946
A0A2L2SN66	A0A2L2SMV6	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.950
A0A2L2SN66	A0A2L2T544	CAP-Gly domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.454
A0A2L2SN66	A0A2L2TGG4	CAP-Gly domain-containing protein.	CAP-Gly domain-containing protein.	0.899
A0A2L2SN66	A0A2L2TKE2	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.454
A0A2L2SN66	A0A2L2TW86	CAP-Gly domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.957
A0A2L2T544	A0A2L2SMV6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.808
A0A2L2T544	A0A2L2SN66	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	CAP-Gly domain-containing protein.	0.454
A0A2L2T544	A0A2L2TW86	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.808
A0A2L2TGG4	A0A2L2SMV6	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.898
A0A2L2TGG4	A0A2L2SN66	CAP-Gly domain-containing protein.	CAP-Gly domain-containing protein.	0.899
A0A2L2TGG4	A0A2L2TW86	CAP-Gly domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.669
A0A2L2TKE2	A0A2L2SMV6	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A2L2TKE2	A0A2L2SN66	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.454
A0A2L2TKE2	A0A2L2TW86	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.808
A0A2L2TW86	A0A2L2SMV6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.946