(9 nodes) Pyridoxal phosphate-dependent decarboxylase network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2TTM4	Uncharacterized protein. (498 aa)
	A0A2L2TJ65	Uncharacterized protein. (572 aa)
	A0A2L2TC50	Uncharacterized protein. (473 aa)
	A0A2L2T8A8	Uncharacterized protein. (499 aa)
	A0A2L2T3R1	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (570 aa)
	A0A2L2SZQ2	Uncharacterized protein. (503 aa)
	A0A2L2SY13	Uncharacterized protein. (482 aa)
	A0A2L2SUP3	Uncharacterized protein. (517 aa)
	A0A2L2ST26	Uncharacterized protein. (1002 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SUP3	A0A2L2SY13	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A2L2SUP3	A0A2L2SZQ2	Uncharacterized protein.	Uncharacterized protein.	0.897
A0A2L2SUP3	A0A2L2T8A8	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A2L2SUP3	A0A2L2TC50	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A2L2SUP3	A0A2L2TTM4	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A2L2SY13	A0A2L2SUP3	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A2L2SY13	A0A2L2SZQ2	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A2L2SZQ2	A0A2L2SUP3	Uncharacterized protein.	Uncharacterized protein.	0.897
A0A2L2SZQ2	A0A2L2SY13	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A2L2SZQ2	A0A2L2T8A8	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A2L2SZQ2	A0A2L2TC50	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A2L2SZQ2	A0A2L2TTM4	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A2L2T8A8	A0A2L2SUP3	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A2L2T8A8	A0A2L2SZQ2	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A2L2T8A8	A0A2L2TTM4	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A2L2TC50	A0A2L2SUP3	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A2L2TC50	A0A2L2SZQ2	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A2L2TTM4	A0A2L2SUP3	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A2L2TTM4	A0A2L2SZQ2	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A2L2TTM4	A0A2L2T8A8	Uncharacterized protein.	Uncharacterized protein.	0.430