(41 nodes) RAB GEFs exchange GTP for GDP on RABs network (Fusarium venenatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2THX4	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (464 aa)
	A0A2L2TH37	Uncharacterized protein. (213 aa)
	A0A2L2TH08	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (220 aa)
	A0A2L2TGM1	Uncharacterized protein. (779 aa)
	A0A2L2TGI8	Sec2p domain-containing protein. (325 aa)
	A0A2L2TFZ6	Uncharacterized protein. (176 aa)
	A0A2L2TFE3	Ysc84 domain-containing protein. (1037 aa)
	A0A2L2TE99	Ysc84 domain-containing protein. (207 aa)
	A0A2L2TDE7	ATP-grasp domain-containing protein. (454 aa)
	A0A2L2TCF3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1451 aa)
	A0A2L2TA68	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1481 aa)
	A0A2L2TA22	Uncharacterized protein. (233 aa)
	A0A2L2T6I1	Uncharacterized protein. (218 aa)
	A0A2L2T6F8	Uncharacterized protein. (208 aa)
	A0A2L2T5D3	SH3 domain-containing protein. (401 aa)
	A0A2L2T511	Ysc84 domain-containing protein. (412 aa)
	A0A2L2T432	Ysc84 domain-containing protein. (609 aa)
	A0A2L2T2K5	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (125 aa)
	A0A2L2T0B6	Uncharacterized protein. (756 aa)
	A0A2L2T028	Uncharacterized protein. (401 aa)
	A0A2L2SX31	Sec2p domain-containing protein. (675 aa)
	A0A2L2SWM9	Uncharacterized protein. (1227 aa)
	A0A2L2SW84	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (495 aa)
	A0A2L2SSA0	Uncharacterized protein. (668 aa)
	A0A2L2SQI0	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
	A0A2L2SNY3	VPS9 domain-containing protein. (742 aa)
	A0A2L2SNL7	Uncharacterized protein. (601 aa)
	A0A2L2U2J8	Uncharacterized protein. (317 aa)
	A0A2L2TY38	Uncharacterized protein. (203 aa)
	A0A2L2TXF7	Trafficking protein particle complex subunit BET3. (189 aa)
	A0A2L2TW77	Uncharacterized protein. (202 aa)
	A0A2L2TVQ6	Uncharacterized protein. (351 aa)
	A0A2L2TV75	Uncharacterized protein. (839 aa)
	A0A2L2TTQ8	Uncharacterized protein. (1153 aa)
	A0A2L2TT15	Uncharacterized protein. (158 aa)
	A0A2L2TRF8	Uncharacterized protein. (195 aa)
	A0A2L2TNX2	RIC1 domain-containing protein. (1086 aa)
	A0A2L2TNG4	Ysc84 domain-containing protein. (468 aa)
	A0A2L2TK33	Uncharacterized protein. (1517 aa)
	A0A2L2TJS3	Uncharacterized protein. (827 aa)
	A0A2L2TIG0	Uncharacterized protein. (1426 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SNL7	A0A2L2SNY3	Uncharacterized protein.	VPS9 domain-containing protein.	0.442
A0A2L2SNL7	A0A2L2SSA0	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A2L2SNL7	A0A2L2SW84	Uncharacterized protein.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.762
A0A2L2SNL7	A0A2L2TGM1	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A2L2SNL7	A0A2L2THX4	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.816
A0A2L2SNL7	A0A2L2TV75	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A2L2SNL7	A0A2L2TY38	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A2L2SNY3	A0A2L2SNL7	VPS9 domain-containing protein.	Uncharacterized protein.	0.442
A0A2L2SNY3	A0A2L2SW84	VPS9 domain-containing protein.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.656
A0A2L2SNY3	A0A2L2T6F8	VPS9 domain-containing protein.	Uncharacterized protein.	0.543
A0A2L2SNY3	A0A2L2TH37	VPS9 domain-containing protein.	Uncharacterized protein.	0.707
A0A2L2SNY3	A0A2L2THX4	VPS9 domain-containing protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.656
A0A2L2SNY3	A0A2L2TV75	VPS9 domain-containing protein.	Uncharacterized protein.	0.874
A0A2L2SNY3	A0A2L2TVQ6	VPS9 domain-containing protein.	Uncharacterized protein.	0.421
A0A2L2SNY3	A0A2L2TW77	VPS9 domain-containing protein.	Uncharacterized protein.	0.494
A0A2L2SQI0	A0A2L2SW84	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.683
A0A2L2SQI0	A0A2L2SWM9	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.990
A0A2L2SQI0	A0A2L2T028	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.889
A0A2L2SQI0	A0A2L2T0B6	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.997
A0A2L2SQI0	A0A2L2T2K5	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.998