(43 nodes) Estrogen-dependent gene expression network (Fusarium venenatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2L2T6T4	GATA-type domain-containing protein. (965 aa)
	A0A2L2T9N0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1757 aa)
	A0A2L2TAJ0	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (211 aa)
	A0A2L2TB98	RPOLD domain-containing protein. (340 aa)
	A0A2L2TBW1	BHLH domain-containing protein. (305 aa)
	A0A2L2TDB5	Protein kinase domain-containing protein. (552 aa)
	A0A2L2TET8	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
	A0A2L2TFM5	Uncharacterized protein. (388 aa)
	A0A2L2TFX4	Uncharacterized protein. (431 aa)
	A0A2L2TIP0	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (501 aa)
	A0A2L2TIP7	Uncharacterized protein. (667 aa)
	A0A2L2TJZ1	Uncharacterized protein. (253 aa)
	A0A2L2TK94	Uncharacterized protein. (364 aa)
	A0A2L2TL91	Uncharacterized protein. (386 aa)
	A0A2L2TM28	GH16 domain-containing protein. (404 aa)
	A0A2L2TPK6	Uncharacterized protein. (72 aa)
	A0A2L2TSW7	Uncharacterized protein. (703 aa)
	A0A2L2TU47	GATA-type domain-containing protein. (476 aa)
	A0A2L2TUB1	GH16 domain-containing protein. (273 aa)
	A0A2L2TUV1	Uncharacterized protein. (535 aa)
	A0A2L2TWD1	Uncharacterized protein. (618 aa)
	A0A2L2TWH8	RPOL4c domain-containing protein. (159 aa)
	A0A2L2TXG1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
	A0A2L2TZ02	Uncharacterized protein. (397 aa)
	A0A2L2U167	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (120 aa)
	A0A2L2U221	Cyclin N-terminal domain-containing protein. (422 aa)
	A0A2L2SND6	Fork-head domain-containing protein. (768 aa)
	A0A2L2SQ06	Uncharacterized protein. (1090 aa)
	A0A2L2SQ67	Histone H2B; Belongs to the histone H2B family. (138 aa)
	A0A2L2STF3	Uncharacterized protein. (151 aa)
	A0A2L2SWD2	Uncharacterized protein. (378 aa)
	A0A2L2SXS5	Uncharacterized protein; Belongs to the DEAD box helicase family. (478 aa)
	A0A2L2SY17	Uncharacterized protein. (280 aa)
	A0A2L2T0T4	CYCLIN domain-containing protein; Belongs to the cyclin family. (438 aa)
	A0A2L2T1C1	RNA_pol_L_2 domain-containing protein. (142 aa)
	A0A2L2T1W4	Uncharacterized protein. (333 aa)
	A0A2L2T2E0	Uncharacterized protein. (234 aa)
	A0A2L2T2L4	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (345 aa)
	A0A2L2T322	Uncharacterized protein. (396 aa)
	A0A2L2T4A8	Uncharacterized protein. (79 aa)
	A0A2L2T4R0	Uncharacterized protein. (361 aa)
	A0A2L2T594	Uncharacterized protein. (178 aa)
	A0A2L2T814	ANK_REP_REGION domain-containing protein. (463 aa)

Your Current Organism:

Fusarium venenatum

NCBI taxonomy Id: 56646
Other names: CBS 458.93, F. venenatum, Fusarium venetum

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2L2SND6	A0A2L2SWD2	Fork-head domain-containing protein.	Uncharacterized protein.	0.594
A0A2L2SND6	A0A2L2SXS5	Fork-head domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.577
A0A2L2SND6	A0A2L2T2L4	Fork-head domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.533
A0A2L2SND6	A0A2L2T322	Fork-head domain-containing protein.	Uncharacterized protein.	0.594
A0A2L2SND6	A0A2L2T6T4	Fork-head domain-containing protein.	GATA-type domain-containing protein.	0.636
A0A2L2SND6	A0A2L2TFM5	Fork-head domain-containing protein.	Uncharacterized protein.	0.594
A0A2L2SND6	A0A2L2TFX4	Fork-head domain-containing protein.	Uncharacterized protein.	0.537
A0A2L2SND6	A0A2L2TIP0	Fork-head domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.585
A0A2L2SND6	A0A2L2TJZ1	Fork-head domain-containing protein.	Uncharacterized protein.	0.548
A0A2L2SND6	A0A2L2TL91	Fork-head domain-containing protein.	Uncharacterized protein.	0.594
A0A2L2SND6	A0A2L2TWD1	Fork-head domain-containing protein.	Uncharacterized protein.	0.894
A0A2L2SND6	A0A2L2TZ02	Fork-head domain-containing protein.	Uncharacterized protein.	0.594
A0A2L2SQ06	A0A2L2SQ67	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.806
A0A2L2SQ67	A0A2L2SQ06	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein.	0.806
A0A2L2SQ67	A0A2L2STF3	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein.	0.945
A0A2L2SQ67	A0A2L2SWD2	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein.	0.806
A0A2L2SQ67	A0A2L2SXS5	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.597
A0A2L2SQ67	A0A2L2T1C1	Histone H2B; Belongs to the histone H2B family.	RNA_pol_L_2 domain-containing protein.	0.943
A0A2L2SQ67	A0A2L2T2E0	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein.	0.954
A0A2L2SQ67	A0A2L2T2L4	Histone H2B; Belongs to the histone H2B family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.703