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| | EPF12265.1 | KEGG: esa:ESA_03738 2.3e-296 ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 9.97. (609 aa) |
| | rpmE | Ribosomal protein L31; Binds the 23S rRNA. (71 aa) |
| | priA | Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (638 aa) |
| | rpmG | Ribosomal protein L33; KEGG: apb:SAR116_0619 1.1e-14 ribosomal protein L33 K02913; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | rpmB | Ribosomal protein L28; KEGG: apb:SAR116_1905 8.8e-11 LSU ribosomal protein L28P K02902; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | slmA | HTH-type protein SlmA; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. (198 aa) |
| | rpmH | Ribosomal protein L34; KEGG: rak:A1C_04775 2.3e-10 rpmH; 50S ribosomal protein L34 K02914; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL34 family. (46 aa) |
| | gyrB | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (804 aa) |
| | EPF12829.1 | FMN-binding domain protein; KEGG: ddd:Dda3937_02688 2.7e-41 transcriptional regulator K07734; Psort location: Cytoplasmic, score: 9.97. (213 aa) |
| | EPF13097.1 | Shikimate kinase; KEGG: kpu:KP1_5135 1.4e-81 gntK; gluconate kinase 1; K00851 gluconokinase. (177 aa) |
| | rpsL | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (209 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (201 aa) |
| | rplW | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (100 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (255 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplV | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (232 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa) |
| | rpmC | Ribosomal protein L29; KEGG: apb:SAR116_2399 6.9e-11 ribosomal protein L29 K02904; Psort location: Cytoplasmic, score: 9.26; Belongs to the universal ribosomal protein uL29 family. (63 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (123 aa) |
| | rplX | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (104 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsN | Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (117 aa) |
| | rpsE | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (166 aa) |
| | rpmD | Ribosomal protein L30; KEGG: apb:SAR116_2409 3.2e-13 ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.26. (59 aa) |
| | EPF13258.1 | Ribosomal protein L15; Psort location: Cytoplasmic, score: 9.26; Belongs to the universal ribosomal protein uL15 family. (73 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | EPF13253.1 | Ribosomal protein L17; KEGG: apb:SAR116_2416 6.0e-28 ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL17 family. (109 aa) |
| | EPF13243.1 | Topoisomerase DNA-binding C4 zinc finger domain protein; KEGG: ddd:Dda3937_01526 9.0e-57 yrdD; putative DNA topoisomerase K07479. (141 aa) |
| | fis | DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (98 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | rpsI | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | EPF14006.1 | Stringent starvation protein B. (167 aa) |
| | EPF13995.1 | Ribosomal subunit interface protein. (95 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | rpmA | Ribosomal protein L27; KEGG: apb:SAR116_1855 3.4e-25 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family. (85 aa) |
| | rpsO | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | EPF13913.1 | KEGG: esa:ESA_03446 2.8e-62 DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi; Psort location: Cytoplasmic, score: 9.26. (152 aa) |
| | EPF13891.1 | KEGG: lbr:LVIS_0774 2.8e-35 superfamily II DNA helicase; K03654 ATP-dependent DNA helicase RecQ. (826 aa) |
| | EPF13889.1 | Queuosine biosynthesis protein QueD; KEGG: ect:ECIAI39_2947 1.0e-55 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS); K01737 6-pyruvoyl tetrahydrobiopterin synthase; Psort location: Cytoplasmic, score: 9.97. (120 aa) |
| | murQ | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. (306 aa) |
| | parE | DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (630 aa) |
| | parC | DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (756 aa) |
| | EPF13634.1 | Transcriptional regulator, TetR family. (189 aa) |
| | EPF13631.1 | Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 5.6e-05 NADH dehydrogenase K03885. (207 aa) |
| | EPF13575.1 | KEGG: sno:Snov_3030 0.0012 putative transcriptional regulator, TetR family. (190 aa) |
| | EPF13566.1 | Queuosine biosynthesis protein QueD; KEGG: enc:ECL_04107 3.5e-62 putative 6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase; Psort location: Cytoplasmic, score: 9.26. (120 aa) |
| | EPF15009.1 | Hypothetical protein; KEGG: tgo:TGME49_076860 0.0062 late embryogenesis abundant domain-containing protein. (119 aa) |
| | EPF14965.1 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (562 aa) |
| | rpsP | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (94 aa) |
| | rimM | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (183 aa) |
| | rplS | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (115 aa) |
| | EPF14940.1 | Hypothetical protein. (884 aa) |
| | EPF14912.1 | Ribosomal subunit interface protein. (114 aa) |
| | EPF15334.1 | DTW domain protein; Psort location: Cytoplasmic, score: 9.26. (175 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (245 aa) |
| | hda | DnaA regulatory inactivator Hda; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily. (238 aa) |
| | mtnC | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family. (227 aa) |
| | mtnD | Acireductone dioxygenase (Ni(2+)-requiring); Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (180 aa) |
| | rpmE2 | Ribosomal protein L31; KEGG: apb:SAR116_2278 0.0023 ribosomal protein L31 K02909. (89 aa) |
| | rpmJ | Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (46 aa) |
| | EPF15420.1 | Putative primosomal replication protein. (178 aa) |
| | EPF15415.1 | DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (109 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (191 aa) |
| | ubiX | Phenolic acid decarboxylase subunit B; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (189 aa) |
| | gyrA | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (880 aa) |
| | rplY | Ribosomal L25p family protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (94 aa) |
| | nfo | Endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (285 aa) |
| | EPF16423.1 | KEGG: esa:ESA_01237 6.3e-191 DNA cytosine methylase; K00558 DNA (cytosine-5-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96. (469 aa) |
| | EPF16274.1 | DNA polymerase III subunit theta. (77 aa) |
| | ispE | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol; Belongs to the GHMP kinase family. IspE subfamily. (289 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (418 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (865 aa) |
| | EPF17060.1 | 3-hydroxyacyl-CoA dehydrogenase PaaC; KEGG: kpe:KPK_2993 4.6e-163 paaH; 3-hydroxy-acyl-CoA dehydrogenase K00074. (476 aa) |
| | EPF17035.1 | KEGG: pjd:Pjdr2_4743 1.1e-85 ATP-dependent DNA helicase, RecQ family; K03654 ATP-dependent DNA helicase RecQ; Psort location: CytoplasmicMembrane, score: 9.82. (1142 aa) |
| | betI | Transcriptional repressor BetI; Repressor involved in choline regulation of the bet genes. (197 aa) |
| | EPF17649.1 | KEGG: ecx:EcHS_A1496 0. hrpA; ATP-dependent RNA helicase HrpA; K03578 ATP-dependent helicase HrpA; Psort location: Cytoplasmic, score: 8.96. (1309 aa) |
| | EPF17614.1 | Transcriptional regulator, TetR family. (193 aa) |
| | EPF17608.1 | Transcriptional regulator, TetR family. (205 aa) |
| | EPF17902.1 | Bacterial transferase hexapeptide repeat protein. (340 aa) |
| | EPF17781.1 | Transcriptional regulator, TetR family. (186 aa) |
| | selO | Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (492 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa) |
| | rpmI | Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | topB | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] (664 aa) |
| | EPF18188.1 | Cupin family protein; KEGG: hip:CGSHiEE_01015 1.3e-39 xseA; exodeoxyribonuclease VII large subunit; Psort location: Cytoplasmic, score: 9.97. (373 aa) |
| | rpmF | Ribosomal protein L32; KEGG: apb:SAR116_0011 5.6e-09 ribosomal protein L32 K02911; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL32 family. (56 aa) |
| | EPF18735.1 | MOSC domain protein; KEGG: ddd:Dda3937_03516 7.2e-119 ycbX; putative 2Fe-2S cluster-containing protein K07140. (357 aa) |
| | ihfB | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (94 aa) |
| | EPF18702.1 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (557 aa) |
| | EPF18687.1 | KEGG: hip:CGSHiEE_05570 6.9e-169 recombination factor protein RarA K07478; Psort location: Cytoplasmic, score: 9.97. (428 aa) |
| | clpS | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (106 aa) |
| | EPF18657.1 | Hypothetical protein; Belongs to the UPF0145 family. (107 aa) |
| | EPF18568.1 | Cupin family protein; KEGG: hip:CGSHiEE_01015 1.5e-38 xseA; exodeoxyribonuclease VII large subunit; Psort location: Cytoplasmic, score: 9.97. (361 aa) |
| | EPF18553.1 | Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 9.26. (188 aa) |
| | EPF18540.1 | Transcriptional regulator, TetR family. (231 aa) |
| | EPF18473.1 | KEGG: ebi:EbC_12840 6.0e-186 phrB; deoxyribodipyrimidine photo-lyase K01669; Psort location: Cytoplasmic, score: 8.96; Belongs to the DNA photolyase family. (469 aa) |
| | nadD | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (215 aa) |
| | EPF20078.1 | Aminotransferase, class V; KEGG: pwa:Pecwa_3465 1.6e-199 aminotransferase class V; K00839 aminotransferase; Psort location: Cytoplasmic, score: 9.97. (461 aa) |
| | rpsB | Ribosomal protein S2; KEGG: apb:SAR116_0519 1.3e-73 ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family. (241 aa) |
| | EPF20865.1 | KEGG: eok:G2583_0152 0. hrpB; ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB; Psort location: CytoplasmicMembrane, score: 9.27. (836 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (234 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (165 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa) |
| | EPF20347.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (468 aa) |
| | EPF20358.1 | NmrA family protein; KEGG: afm:AFUA_6G00280 1.5e-61 NmrA-like family protein K00224. (311 aa) |
| | EPF20447.1 | Putative transcriptional regulator. (191 aa) |
| | diaA | DnaA initiator-associating protein DiaA; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. (196 aa) |
| | miaA | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (314 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (131 aa) |
| | priB | Single-strand binding family protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (105 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa) |
| | rplI | Ribosomal protein L9; Binds to the 23S rRNA. (149 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (584 aa) |
| | rpsU | Ribosomal protein S21; KEGG: sew:SeSA_A3399 3.4e-32 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS21 family. (71 aa) |
| | EPF20694.1 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. (139 aa) |
| | EPF20745.1 | Ribosomal protein S20. (61 aa) |
| | EPF20746.1 | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. (310 aa) |
| | EPF20769.1 | Putative Ferredoxin-like protein FixX; Could be a 3Fe-4S cluster-containing protein. (95 aa) |
| | EPF20786.1 | DNA polymerase II; KEGG: esa:ESA_03280 0. DNA polymerase II; K02336 DNA polymerase II; Psort location: Cytoplasmic, score: 9.97. (800 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa) |
