5 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_16_1690	Putative U1 small nuclear ribonucleoprotein. (375 aa)
	LINJ_27_1890	Putative small nuclear ribonucleoprotein protein. (111 aa)
	LINJ_29_0910	Uncharacterized protein. (114 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LINJ_33_3340	Small nuclear ribonucleoprotein Sm D2. (103 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_16_1690	LINJ_27_1890	A4HX57	A4I304	Putative U1 small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein protein.	0.999
LINJ_16_1690	LINJ_29_0910	A4HX57	A4I4E0	Putative U1 small nuclear ribonucleoprotein.	Uncharacterized protein.	0.995
LINJ_16_1690	LINJ_32_1130	A4HX57	A4I7S4	Putative U1 small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_16_1690	LINJ_33_3340	A4HX57	A4I9G0	Putative U1 small nuclear ribonucleoprotein.	Small nuclear ribonucleoprotein Sm D2.	0.999
LINJ_27_1890	LINJ_16_1690	A4I304	A4HX57	Putative small nuclear ribonucleoprotein protein.	Putative U1 small nuclear ribonucleoprotein.	0.999
LINJ_27_1890	LINJ_29_0910	A4I304	A4I4E0	Putative small nuclear ribonucleoprotein protein.	Uncharacterized protein.	0.999
LINJ_27_1890	LINJ_32_1130	A4I304	A4I7S4	Putative small nuclear ribonucleoprotein protein.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_27_1890	LINJ_33_3340	A4I304	A4I9G0	Putative small nuclear ribonucleoprotein protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
LINJ_29_0910	LINJ_16_1690	A4I4E0	A4HX57	Uncharacterized protein.	Putative U1 small nuclear ribonucleoprotein.	0.995
LINJ_29_0910	LINJ_27_1890	A4I4E0	A4I304	Uncharacterized protein.	Putative small nuclear ribonucleoprotein protein.	0.999
LINJ_29_0910	LINJ_32_1130	A4I4E0	A4I7S4	Uncharacterized protein.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_29_0910	LINJ_33_3340	A4I4E0	A4I9G0	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
LINJ_32_1130	LINJ_16_1690	A4I7S4	A4HX57	Putative small nuclear ribonucleoprotein.	Putative U1 small nuclear ribonucleoprotein.	0.999
LINJ_32_1130	LINJ_27_1890	A4I7S4	A4I304	Putative small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein protein.	0.999
LINJ_32_1130	LINJ_29_0910	A4I7S4	A4I4E0	Putative small nuclear ribonucleoprotein.	Uncharacterized protein.	0.999
LINJ_32_1130	LINJ_33_3340	A4I7S4	A4I9G0	Putative small nuclear ribonucleoprotein.	Small nuclear ribonucleoprotein Sm D2.	0.999
LINJ_33_3340	LINJ_16_1690	A4I9G0	A4HX57	Small nuclear ribonucleoprotein Sm D2.	Putative U1 small nuclear ribonucleoprotein.	0.999
LINJ_33_3340	LINJ_27_1890	A4I9G0	A4I304	Small nuclear ribonucleoprotein Sm D2.	Putative small nuclear ribonucleoprotein protein.	0.999
LINJ_33_3340	LINJ_29_0910	A4I9G0	A4I4E0	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.999
LINJ_33_3340	LINJ_32_1130	A4I9G0	A4I7S4	Small nuclear ribonucleoprotein Sm D2.	Putative small nuclear ribonucleoprotein.	0.999