9 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_16_1730	Nop domain-containing protein. (239 aa)
	LINJ_30_1270	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
	LINJ_33_0140	Putative trans-splicing factor. (341 aa)
	LINJ_33_3340	Small nuclear ribonucleoprotein Sm D2. (103 aa)
	LINJ_32_2630	Uncharacterized protein. (1290 aa)
	LINJ_35_4000	Putative PRP8 protein homologue. (2427 aa)
	LINJ_35_4530	Putative sm-f snRNP core complex protein. (76 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (197 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_16_1730	LINJ_30_1270	A4HX61	A4I5F2	Nop domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.968
LINJ_16_1730	LINJ_32_1130	A4HX61	A4I7S4	Nop domain-containing protein.	Putative small nuclear ribonucleoprotein.	0.933
LINJ_16_1730	LINJ_32_2630	A4HX61	A4I870	Nop domain-containing protein.	Uncharacterized protein.	0.961
LINJ_16_1730	LINJ_33_3340	A4HX61	A4I9G0	Nop domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.934
LINJ_16_1730	LINJ_35_4000	A4HX61	A4IBT3	Nop domain-containing protein.	Putative PRP8 protein homologue.	0.956
LINJ_16_1730	LINJ_35_4530	A4HX61	A4IBY6	Nop domain-containing protein.	Putative sm-f snRNP core complex protein.	0.947
LINJ_16_1730	LSM4	A4HX61	A4I7N8	Nop domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.945
LINJ_30_1270	LINJ_16_1730	A4I5F2	A4HX61	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Nop domain-containing protein.	0.968
LINJ_30_1270	LINJ_32_1130	A4I5F2	A4I7S4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_30_1270	LINJ_32_2630	A4I5F2	A4I870	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.999
LINJ_30_1270	LINJ_33_0140	A4I5F2	A4I8M9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative trans-splicing factor.	0.968
LINJ_30_1270	LINJ_33_3340	A4I5F2	A4I9G0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
LINJ_30_1270	LINJ_35_4000	A4I5F2	A4IBT3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative PRP8 protein homologue.	0.999
LINJ_30_1270	LINJ_35_4530	A4I5F2	A4IBY6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative sm-f snRNP core complex protein.	0.999
LINJ_30_1270	LSM4	A4I5F2	A4I7N8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
LINJ_32_1130	LINJ_16_1730	A4I7S4	A4HX61	Putative small nuclear ribonucleoprotein.	Nop domain-containing protein.	0.933
LINJ_32_1130	LINJ_30_1270	A4I7S4	A4I5F2	Putative small nuclear ribonucleoprotein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
LINJ_32_1130	LINJ_32_2630	A4I7S4	A4I870	Putative small nuclear ribonucleoprotein.	Uncharacterized protein.	0.999
LINJ_32_1130	LINJ_33_0140	A4I7S4	A4I8M9	Putative small nuclear ribonucleoprotein.	Putative trans-splicing factor.	0.933
LINJ_32_1130	LINJ_33_3340	A4I7S4	A4I9G0	Putative small nuclear ribonucleoprotein.	Small nuclear ribonucleoprotein Sm D2.	0.999