17 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_36_0570	Putative small nuclear ribonucleaoprotein. (141 aa)
	LINJ_36_3190	Putative pre-mRNA branch site protein p14. (182 aa)
	LINJ_36_4490	Uncharacterized protein. (824 aa)
	LINJ_03_0500	Uncharacterized protein. (857 aa)
	LINJ_23_1950	Uncharacterized protein. (794 aa)
	LINJ_27_2590	Uncharacterized protein. (696 aa)
	LINJ_34_3670	Small nuclear ribonucleoprotein Sm D3. (113 aa)
	LINJ_32_2350	Small nuclear ribonucleoprotein component-like protein. (1017 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LINJ_30_0590	Putative spliceosome-associated protein. (474 aa)
	LINJ_29_1310	Uncharacterized protein. (477 aa)
	LINJ_28_2780	Putative splicing factor 3B subunit 1. (1026 aa)
	LINJ_27_2430	Uncharacterized protein. (513 aa)
	LINJ_26_0010	Putative Lsm7p protein. (91 aa)
	LINJ_25_1440	Uncharacterized protein. (395 aa)
	LINJ_22_0740	Uncharacterized protein. (553 aa)
	LINJ_02_0110	Uncharacterized protein. (239 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_02_0110	LINJ_03_0500	A4HRL6	E9AG41	Uncharacterized protein.	Uncharacterized protein.	0.942
LINJ_02_0110	LINJ_23_1950	A4HRL6	E9AH17	Uncharacterized protein.	Uncharacterized protein.	0.978
LINJ_02_0110	LINJ_25_1440	A4HRL6	A4I1I4	Uncharacterized protein.	Uncharacterized protein.	0.999
LINJ_02_0110	LINJ_26_0010	A4HRL6	A4I1T9	Uncharacterized protein.	Putative Lsm7p protein.	0.957
LINJ_02_0110	LINJ_27_2430	A4HRL6	A4I350	Uncharacterized protein.	Uncharacterized protein.	0.999
LINJ_02_0110	LINJ_27_2590	A4HRL6	E9AHC8	Uncharacterized protein.	Uncharacterized protein.	0.676
LINJ_02_0110	LINJ_28_2780	A4HRL6	A4I3Z1	Uncharacterized protein.	Putative splicing factor 3B subunit 1.	0.999
LINJ_02_0110	LINJ_29_1310	A4HRL6	A4I4H9	Uncharacterized protein.	Uncharacterized protein.	0.491
LINJ_02_0110	LINJ_30_0590	A4HRL6	A4I585	Uncharacterized protein.	Putative spliceosome-associated protein.	0.999
LINJ_02_0110	LINJ_32_1130	A4HRL6	A4I7S4	Uncharacterized protein.	Putative small nuclear ribonucleoprotein.	0.998
LINJ_02_0110	LINJ_32_2350	A4HRL6	A4I843	Uncharacterized protein.	Small nuclear ribonucleoprotein component-like protein.	0.985
LINJ_02_0110	LINJ_34_3670	A4HRL6	A4IAF5	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.958
LINJ_02_0110	LINJ_36_0570	A4HRL6	A4ICT3	Uncharacterized protein.	Putative small nuclear ribonucleaoprotein.	0.958
LINJ_02_0110	LINJ_36_3190	A4HRL6	A4ID92	Uncharacterized protein.	Putative pre-mRNA branch site protein p14.	0.999
LINJ_02_0110	LINJ_36_4490	A4HRL6	A4IE46	Uncharacterized protein.	Uncharacterized protein.	0.968
LINJ_03_0500	LINJ_02_0110	E9AG41	A4HRL6	Uncharacterized protein.	Uncharacterized protein.	0.942
LINJ_03_0500	LINJ_23_1950	E9AG41	E9AH17	Uncharacterized protein.	Uncharacterized protein.	0.564
LINJ_03_0500	LINJ_25_1440	E9AG41	A4I1I4	Uncharacterized protein.	Uncharacterized protein.	0.651
LINJ_03_0500	LINJ_27_2430	E9AG41	A4I350	Uncharacterized protein.	Uncharacterized protein.	0.844
LINJ_03_0500	LINJ_28_2780	E9AG41	A4I3Z1	Uncharacterized protein.	Putative splicing factor 3B subunit 1.	0.999