STRINGSTRING
LINJ_34_3670 LINJ_34_3670 LINJ_32_1130 LINJ_32_1130 LINJ_30_1270 LINJ_30_1270 LINJ_16_1730 LINJ_16_1730 LINJ_36_0570 LINJ_36_0570 LINJ_33_0140 LINJ_33_0140
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LINJ_34_3670Small nuclear ribonucleoprotein Sm D3. (113 aa)
LINJ_32_1130Putative small nuclear ribonucleoprotein. (81 aa)
LINJ_30_1270Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
LINJ_16_1730Nop domain-containing protein. (239 aa)
LINJ_36_0570Putative small nuclear ribonucleaoprotein. (141 aa)
LINJ_33_0140Putative trans-splicing factor. (341 aa)
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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