STRINGSTRING
LINJ_15_1090 LINJ_15_1090 LINJ_30_0590 LINJ_30_0590 LINJ_30_0560 LINJ_30_0560 LINJ_30_0420 LINJ_30_0420 LINJ_30_0250 LINJ_30_0250 LINJ_29_2710 LINJ_29_2710 LINJ_29_1500 LINJ_29_1500 LINJ_29_1310 LINJ_29_1310 LINJ_29_0910 LINJ_29_0910 LINJ_29_0400 LINJ_29_0400 LINJ_29_0310 LINJ_29_0310 LINJ_28_3190 LINJ_28_3190 LINJ_28_2780 LINJ_28_2780 LINJ_28_2500 LINJ_28_2500 LINJ_27_0800 LINJ_27_0800 LINJ_27_2430 LINJ_27_2430 LINJ_27_1140 LINJ_27_1140 LINJ_26_1510 LINJ_26_1510 LINJ_26_1040 LINJ_26_1040 LINJ_26_0950 LINJ_26_0950 MP100 MP100 LINJ_26_0750 LINJ_26_0750 LINJ_26_0730 LINJ_26_0730 LINJ_26_0280 LINJ_26_0280 LINJ_26_0010 LINJ_26_0010 LINJ_25_2270 LINJ_25_2270 LINJ_25_1930 LINJ_25_1930 LINJ_25_1910 LINJ_25_1910 LINJ_25_1780 LINJ_25_1780 LINJ_25_1770 LINJ_25_1770 LINJ_25_1440 LINJ_25_1440 LINJ_25_0950 LINJ_25_0950 LINJ_25_0170 LINJ_25_0170 LINJ_24_1120 LINJ_24_1120 LINJ_23_0890 LINJ_23_0890 LINJ_23_0820 LINJ_23_0820 LINJ_22_0880 LINJ_22_0880 LINJ_22_0740 LINJ_22_0740 LINJ_21_1820 LINJ_21_1820 LINJ_20_1170 LINJ_20_1170 LINJ_18_0590 LINJ_18_0590 LINJ_17_1250 LINJ_17_1250 LINJ_17_1030 LINJ_17_1030 LINJ_17_0930 LINJ_17_0930 LINJ_17_0910 LINJ_17_0910 LINJ_17_0850 LINJ_17_0850 LINJ_17_0400 LINJ_17_0400 LINJ_16_1730 LINJ_16_1730 LINJ_01_0190 LINJ_01_0190 LINJ_01_0580 LINJ_01_0580 LINJ_01_0610 LINJ_01_0610 LINJ_01_0770 LINJ_01_0770 LINJ_02_0110 LINJ_02_0110 LINJ_03_0180 LINJ_03_0180 LINJ_04_1190 LINJ_04_1190 LINJ_05_0190 LINJ_05_0190 LINJ_05_0590 LINJ_05_0590 LINJ_05_0890 LINJ_05_0890 LINJ_07_0020 LINJ_07_0020 LINJ_07_0460 LINJ_07_0460 LINJ_07_1020 LINJ_07_1020 LINJ_07_1250 LINJ_07_1250 LINJ_08_0080 LINJ_08_0080 LINJ_08_1090 LINJ_08_1090 LINJ_09_0080 LINJ_09_0080 LINJ_09_0410 LINJ_09_0410 LINJ_11_0590 LINJ_11_0590 LINJ_36_6970 LINJ_36_6970 LINJ_35_2240 LINJ_35_2240 LINJ_27_2590 LINJ_27_2590 LINJ_23_1950 LINJ_23_1950 LINJ_23_0600 LINJ_23_0600 LINJ_22_0011 LINJ_22_0011 LINJ_17_1020 LINJ_17_1020 LINJ_03_0500 LINJ_03_0500 LINJ_36_4490 LINJ_36_4490 LINJ_36_5660 LINJ_36_5660 LINJ_36_5390 LINJ_36_5390 LINJ_36_5050 LINJ_36_5050 LINJ_36_1870 LINJ_36_1870 LINJ_36_3190 LINJ_36_3190 LINJ_36_3070 LINJ_36_3070 LINJ_36_3900 LINJ_36_3900 LINJ_36_4170 LINJ_36_4170 LINJ_36_0130 LINJ_36_0130 LINJ_36_0930 LINJ_36_0930 LINJ_35_5290 LINJ_35_5290 LINJ_35_4700 LINJ_35_4700 LINJ_35_4530 LINJ_35_4530 LINJ_35_4150 LINJ_35_4150 LINJ_35_4000 LINJ_35_4000 LINJ_35_3100 LINJ_35_3100 LINJ_35_2440 LINJ_35_2440 LINJ_35_1210 LINJ_35_1210 LINJ_34_4190 LINJ_34_4190 LINJ_34_3210 LINJ_34_3210 LINJ_34_2030 LINJ_34_2030 LINJ_33_3340 LINJ_33_3340 LINJ_33_2250 LINJ_33_2250 LINJ_33_1560 LINJ_33_1560 LINJ_33_1550 LINJ_33_1550 LINJ_33_1540 LINJ_33_1540 LINJ_33_1530 LINJ_33_1530 LINJ_33_0300 LINJ_33_0300 LINJ_33_0140 LINJ_33_0140 LINJ_32_4100 LINJ_32_4100 LINJ_32_2630 LINJ_32_2630 LINJ_32_2350 LINJ_32_2350 LINJ_32_2260 LINJ_32_2260 LINJ_32_1400 LINJ_32_1400 LINJ_32_1130 LINJ_32_1130 LINJ_32_0900 LINJ_32_0900 LINJ_32_0760 LINJ_32_0760 LSM4 LSM4 LINJ_32_0180 LINJ_32_0180 LINJ_31_2860 LINJ_31_2860 LINJ_31_0220 LINJ_31_0220 LINJ_30_3640 LINJ_30_3640 LINJ_30_3620 LINJ_30_3620 LINJ_30_2420 LINJ_30_2420 LINJ_30_2190 LINJ_30_2190 LINJ_30_1820 LINJ_30_1820 LINJ_30_1270 LINJ_30_1270 LINJ_16_1690 LINJ_16_1690 LINJ_15_1530 LINJ_15_1530 LINJ_14_1260 LINJ_14_1260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LINJ_15_1090Uncharacterized protein. (427 aa)
LINJ_30_0590Putative spliceosome-associated protein. (474 aa)
LINJ_30_0560Nuclear cap-binding protein subunit 2. (188 aa)
LINJ_30_0420WD-40 repeat protein. (479 aa)
LINJ_30_0250Putative ubiquitin hydrolase. (1132 aa)
LINJ_29_2710Putative poly(A) polymerase. (500 aa)
LINJ_29_1500Putative RNA binding protein. (783 aa)
LINJ_29_1310Uncharacterized protein. (477 aa)
LINJ_29_0910Uncharacterized protein. (114 aa)
LINJ_29_0400Putative RNA binding protein. (260 aa)
LINJ_29_0310Uncharacterized protein. (337 aa)
LINJ_28_3190Putative U5 snRNP-specific 40 kDa protein. (322 aa)
LINJ_28_2780Putative splicing factor 3B subunit 1. (1026 aa)
LINJ_28_2500Uncharacterized protein. (691 aa)
LINJ_27_0800Uncharacterized protein. (570 aa)
LINJ_27_2430Uncharacterized protein. (513 aa)
LINJ_27_1140Uncharacterized protein. (321 aa)
LINJ_26_1510Uncharacterized protein. (221 aa)
LINJ_26_1040Uncharacterized protein. (328 aa)
LINJ_26_0950Protein kinase domain-containing protein. (1395 aa)
MP100Putative RNA-editing complex protein MP100. (993 aa)
LINJ_26_0750Uncharacterized protein. (154 aa)
LINJ_26_0730Uncharacterized protein. (158 aa)
LINJ_26_0280Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (271 aa)
LINJ_26_0010Putative Lsm7p protein. (91 aa)
LINJ_25_2270Uncharacterized protein. (445 aa)
LINJ_25_1930Uncharacterized protein. (521 aa)
LINJ_25_1910Uncharacterized protein. (998 aa)
LINJ_25_1780Uncharacterized protein. (131 aa)
LINJ_25_1770Uncharacterized protein. (1160 aa)
LINJ_25_1440Uncharacterized protein. (395 aa)
LINJ_25_0950Uncharacterized protein. (852 aa)
LINJ_25_0170Cleavage and polyadenylation specificity factor subunit 2. (819 aa)
LINJ_24_1120Putative pre-mRNA splicing factor. (1086 aa)
LINJ_23_0890Uncharacterized protein. (587 aa)
LINJ_23_0820Putative spliceosomal U5 snRNP-specific protein. (217 aa)
LINJ_22_0880Putative small nuclear ribonucleoprotein. (103 aa)
LINJ_22_0740Uncharacterized protein. (553 aa)
LINJ_21_1820Putative RNA helicase. (517 aa)
LINJ_20_1170Uncharacterized protein. (269 aa)
LINJ_18_0590Putative RNA binding protein. (421 aa)
LINJ_17_1250Putative 5'-3' exonuclease. (1158 aa)
LINJ_17_1030Putative ATP-dependent RNA helicase. (1669 aa)
LINJ_17_0930Uncharacterized protein. (621 aa)
LINJ_17_0910Uncharacterized protein. (207 aa)
LINJ_17_0850Uncharacterized protein. (808 aa)
LINJ_17_0400Uncharacterized protein. (595 aa)
LINJ_16_1730Nop domain-containing protein. (239 aa)
LINJ_01_0190Uncharacterized protein. (207 aa)
LINJ_01_0580Uncharacterized protein. (622 aa)
LINJ_01_0610Mitochondrial RNA editing ligase 1. (424 aa)
LINJ_01_0770Uncharacterized protein. (1415 aa)
LINJ_02_0110Uncharacterized protein. (239 aa)
LINJ_03_0180Putative U2 splicing auxiliary factor. (210 aa)
LINJ_04_1190Putative RNA-binding protein. (311 aa)
LINJ_05_0190Uncharacterized protein. (361 aa)
LINJ_05_0590Putative ATP-dependent RNA helicase. (1006 aa)
LINJ_05_0890Uncharacterized protein. (1983 aa)
LINJ_07_0020Uncharacterized protein. (293 aa)
LINJ_07_0460Uncharacterized protein. (850 aa)
LINJ_07_1020Splicing factor ptsr1-like protein. (375 aa)
LINJ_07_1250Uncharacterized protein. (839 aa)
LINJ_08_0080Putative ATP-dependent DEAD/H RNA helicase; Belongs to the DEAD box helicase family. (685 aa)
LINJ_08_1090Uncharacterized protein. (417 aa)
LINJ_09_0080Putative RNA-binding protein 5. (131 aa)
LINJ_09_0410Uncharacterized protein. (272 aa)
LINJ_11_0590Uncharacterized protein. (1060 aa)
LINJ_36_6970Putative methyltransferase. (400 aa)
LINJ_35_2240Putative RNA-binding protein. (274 aa)
LINJ_27_2590Uncharacterized protein. (696 aa)
LINJ_23_1950Uncharacterized protein. (794 aa)
LINJ_23_0600Putative 5'-3' exonuclease XRNC. (1068 aa)
LINJ_22_0011Putative methyltransferase. (1044 aa)
LINJ_17_1020Putative ATP-dependent RNA helicase. (278 aa)
LINJ_03_0500Uncharacterized protein. (857 aa)
LINJ_36_4490Uncharacterized protein. (824 aa)
LINJ_36_5660Putative branch point binding protein. (289 aa)
LINJ_36_5390Uncharacterized protein. (565 aa)
LINJ_36_5050Uncharacterized protein. (509 aa)
LINJ_36_1870Putative exoribonuclease 2. (879 aa)
LINJ_36_3190Putative pre-mRNA branch site protein p14. (182 aa)
LINJ_36_3070Uncharacterized protein. (113 aa)
LINJ_36_3900Uncharacterized protein. (452 aa)
LINJ_36_4170Uncharacterized protein. (363 aa)
LINJ_36_0130Putative mRNA capping methyltransferase. (323 aa)
LINJ_36_0930Putative DEAH-box RNA helicase. (944 aa)
LINJ_35_5290Uncharacterized protein. (597 aa)
LINJ_35_4700Uncharacterized protein. (491 aa)
LINJ_35_4530Putative sm-f snRNP core complex protein. (76 aa)
LINJ_35_4150Uncharacterized protein. (84 aa)
LINJ_35_4000Putative PRP8 protein homologue. (2427 aa)
LINJ_35_3100Uncharacterized protein. (407 aa)
LINJ_35_2440Uncharacterized protein. (152 aa)
LINJ_35_1210Putative pre-mRNA splicing factor ATP-dependent RNA helicase. (704 aa)
LINJ_34_4190RNA-binding protein-like protein. (390 aa)
LINJ_34_3210Putative cleavage and polyadenylation specificity factor. (756 aa)
LINJ_34_2030ATP-dependent RNA helicase-like protein. (808 aa)
LINJ_33_3340Small nuclear ribonucleoprotein Sm D2. (103 aa)
LINJ_33_2250Uncharacterized protein. (920 aa)
LINJ_33_1560Putative RNA-binding protein. (128 aa)
LINJ_33_1550Uncharacterized protein. (330 aa)
LINJ_33_1540Uncharacterized protein. (209 aa)
LINJ_33_1530Uncharacterized protein. (678 aa)
LINJ_33_0300Uncharacterized protein. (511 aa)
LINJ_33_0140Putative trans-splicing factor. (341 aa)
LINJ_32_4100Uncharacterized protein. (994 aa)
LINJ_32_2630Uncharacterized protein. (1290 aa)
LINJ_32_2350Small nuclear ribonucleoprotein component-like protein. (1017 aa)
LINJ_32_2260Uncharacterized protein. (404 aa)
LINJ_32_1400Cleavage and polyadenylation specificity factor-like protein. (1542 aa)
LINJ_32_1130Putative small nuclear ribonucleoprotein. (81 aa)
LINJ_32_0900Uncharacterized protein. (758 aa)
LINJ_32_0760Uncharacterized protein. (481 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (197 aa)
LINJ_32_0180Putative U2 small nuclear ribonucleoprotein 40K. (308 aa)
LINJ_31_2860Uncharacterized protein. (313 aa)
LINJ_31_0220Uncharacterized protein. (521 aa)
LINJ_30_3640Putative serine/threonine-protein kinase. (748 aa)
LINJ_30_3620Putative mago nashi-like protein. (162 aa)
LINJ_30_2420Pre-mRNA cleavage complex II Clp1-like protein. (425 aa)
LINJ_30_2190Uncharacterized protein. (503 aa)
LINJ_30_1820Putative splicing factor 3a. (621 aa)
LINJ_30_1270Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
LINJ_16_1690Putative U1 small nuclear ribonucleoprotein. (375 aa)
LINJ_15_1530Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
LINJ_14_1260Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (709 aa)
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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