Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LINJ_02_0110 | LINJ_30_1820 | A4HRL6 | A4I5K9 | Uncharacterized protein. | Putative splicing factor 3a. | 0.999 |
| LINJ_02_0110 | LINJ_36_3070 | A4HRL6 | A4ID80 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
| LINJ_06_0630 | LINJ_28_0280 | A4HSV2 | A4I3A0 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Carbonic anhydrase-like protein. | 0.561 |
| LINJ_07_0240 | LINJ_31_0010 | A4HT60 | A4I695 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative 5-methyltetrahydropteroyltriglutamate-homocystein e S-methyltransferase. | 0.992 |
| LINJ_07_0240 | LINJ_36_6570 | A4HT60 | A4IE37 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative homocysteine S-methyltransferase. | 0.942 |
| LINJ_07_0240 | LinJ28.1900 | A4HT60 | A4I3R0 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). | 0.502 |
| LINJ_07_0240 | SHMT-L | A4HT60 | A4I3W7 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.961 |
| LINJ_07_0240 | SHMT-S | A4HT60 | A4HW78 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.961 |
| LINJ_09_0790 | LINJ_27_0120 | A4HTZ5 | A4I364 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.418 |
| LINJ_09_0790 | LINJ_28_1200 | A4HTZ5 | A4I3I6 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.408 |
| LINJ_09_0790 | LINJ_29_1770 | A4HTZ5 | A4I4M7 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Putative Zn-finger domain protein. | 0.418 |
| LINJ_09_0790 | LINJ_31_0040 | A4HTZ5 | A4I697 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.418 |
| LINJ_09_0790 | LINJ_31_1950 | A4HTZ5 | A4I6W7 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.418 |
| LINJ_10_0330 | LINJ_25_1380 | A4HUE1 | A4I1H8 | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | Uncharacterized protein. | 0.991 |
| LINJ_10_0330 | LINJ_29_0230 | A4HUE1 | A4I475 | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | Uncharacterized protein. | 0.990 |
| LINJ_10_0330 | LINJ_36_6710 | A4HUE1 | A4IC99 | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.437 |
| LINJ_13_1020 | LINJ_16_1420 | A4HVP0 | A4HX31 | Putative DNA-directed RNA polymerase ii 8.2 Kd polypeptide. | Putative DNA-directed rna polymerase I largest subunit. | 0.981 |
| LINJ_13_1020 | LINJ_19_0420 | A4HVP0 | A4HY64 | Putative DNA-directed RNA polymerase ii 8.2 Kd polypeptide. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.952 |
| LINJ_13_1020 | LINJ_21_0040 | A4HVP0 | A4HZL7 | Putative DNA-directed RNA polymerase ii 8.2 Kd polypeptide. | Putative ring-box protein 1. | 0.675 |
| LINJ_13_1020 | LINJ_24_1680 | A4HVP0 | E9AH68 | Putative DNA-directed RNA polymerase ii 8.2 Kd polypeptide. | Putative ring-box protein. | 0.675 |
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