9 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_16_1690	Putative U1 small nuclear ribonucleoprotein. (375 aa)
	LINJ_05_0890	Uncharacterized protein. (1983 aa)
	LINJ_07_0460	Uncharacterized protein. (850 aa)
	LINJ_25_1770	Uncharacterized protein. (1160 aa)
	LINJ_29_0910	Uncharacterized protein. (114 aa)
	LINJ_32_0180	Putative U2 small nuclear ribonucleoprotein 40K. (308 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (197 aa)
	LINJ_32_2350	Small nuclear ribonucleoprotein component-like protein. (1017 aa)
	LINJ_35_4000	Putative PRP8 protein homologue. (2427 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_05_0890	LINJ_07_0460	A4HSL1	A4HT48	Uncharacterized protein.	Uncharacterized protein.	0.852
LINJ_05_0890	LINJ_16_1690	A4HSL1	A4HX57	Uncharacterized protein.	Putative U1 small nuclear ribonucleoprotein.	0.954
LINJ_05_0890	LINJ_25_1770	A4HSL1	A4I1L7	Uncharacterized protein.	Uncharacterized protein.	0.852
LINJ_05_0890	LINJ_29_0910	A4HSL1	A4I4E0	Uncharacterized protein.	Uncharacterized protein.	0.994
LINJ_05_0890	LINJ_32_0180	A4HSL1	A4I7I1	Uncharacterized protein.	Putative U2 small nuclear ribonucleoprotein 40K.	0.852
LINJ_05_0890	LINJ_32_2350	A4HSL1	A4I843	Uncharacterized protein.	Small nuclear ribonucleoprotein component-like protein.	0.997
LINJ_05_0890	LINJ_35_4000	A4HSL1	A4IBT3	Uncharacterized protein.	Putative PRP8 protein homologue.	0.998
LINJ_05_0890	LSM4	A4HSL1	A4I7N8	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.966
LINJ_07_0460	LINJ_05_0890	A4HT48	A4HSL1	Uncharacterized protein.	Uncharacterized protein.	0.852
LINJ_07_0460	LINJ_16_1690	A4HT48	A4HX57	Uncharacterized protein.	Putative U1 small nuclear ribonucleoprotein.	0.774
LINJ_07_0460	LINJ_29_0910	A4HT48	A4I4E0	Uncharacterized protein.	Uncharacterized protein.	0.919
LINJ_07_0460	LINJ_32_2350	A4HT48	A4I843	Uncharacterized protein.	Small nuclear ribonucleoprotein component-like protein.	0.777
LINJ_07_0460	LINJ_35_4000	A4HT48	A4IBT3	Uncharacterized protein.	Putative PRP8 protein homologue.	0.760
LINJ_07_0460	LSM4	A4HT48	A4I7N8	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.747
LINJ_16_1690	LINJ_05_0890	A4HX57	A4HSL1	Putative U1 small nuclear ribonucleoprotein.	Uncharacterized protein.	0.954
LINJ_16_1690	LINJ_07_0460	A4HX57	A4HT48	Putative U1 small nuclear ribonucleoprotein.	Uncharacterized protein.	0.774
LINJ_16_1690	LINJ_25_1770	A4HX57	A4I1L7	Putative U1 small nuclear ribonucleoprotein.	Uncharacterized protein.	0.774
LINJ_16_1690	LINJ_29_0910	A4HX57	A4I4E0	Putative U1 small nuclear ribonucleoprotein.	Uncharacterized protein.	0.995
LINJ_16_1690	LINJ_32_0180	A4HX57	A4I7I1	Putative U1 small nuclear ribonucleoprotein.	Putative U2 small nuclear ribonucleoprotein 40K.	0.774
LINJ_16_1690	LINJ_32_2350	A4HX57	A4I843	Putative U1 small nuclear ribonucleoprotein.	Small nuclear ribonucleoprotein component-like protein.	0.828