27 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_05_0890	Uncharacterized protein. (1983 aa)
	LINJ_02_0110	Uncharacterized protein. (239 aa)
	LINJ_26_0730	Uncharacterized protein. (158 aa)
	LINJ_26_0010	Putative Lsm7p protein. (91 aa)
	LINJ_25_1780	Uncharacterized protein. (131 aa)
	LINJ_25_1440	Uncharacterized protein. (395 aa)
	LINJ_23_0820	Putative spliceosomal U5 snRNP-specific protein. (217 aa)
	LINJ_22_0740	Uncharacterized protein. (553 aa)
	LINJ_34_3670	Small nuclear ribonucleoprotein Sm D3. (113 aa)
	LINJ_33_3340	Small nuclear ribonucleoprotein Sm D2. (103 aa)
	LINJ_33_0140	Putative trans-splicing factor. (341 aa)
	LINJ_32_2630	Uncharacterized protein. (1290 aa)
	LINJ_32_2350	Small nuclear ribonucleoprotein component-like protein. (1017 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (197 aa)
	LINJ_30_1270	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
	LINJ_30_0590	Putative spliceosome-associated protein. (474 aa)
	LINJ_28_2780	Putative splicing factor 3B subunit 1. (1026 aa)
	LINJ_36_3190	Putative pre-mRNA branch site protein p14. (182 aa)
	LINJ_36_3070	Uncharacterized protein. (113 aa)
	LINJ_36_0570	Putative small nuclear ribonucleaoprotein. (141 aa)
	LINJ_35_4530	Putative sm-f snRNP core complex protein. (76 aa)
	LINJ_01_0580	Uncharacterized protein. (622 aa)
	LINJ_01_0190	Uncharacterized protein. (207 aa)
	LINJ_35_4150	Uncharacterized protein. (84 aa)
	LINJ_35_4000	Putative PRP8 protein homologue. (2427 aa)
	LINJ_16_1730	Nop domain-containing protein. (239 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_01_0190	LINJ_02_0110	A4HRE0	A4HRL6	Uncharacterized protein.	Uncharacterized protein.	0.985
LINJ_01_0190	LINJ_05_0890	A4HRE0	A4HSL1	Uncharacterized protein.	Uncharacterized protein.	0.970
LINJ_01_0190	LINJ_22_0740	A4HRE0	A4HZW5	Uncharacterized protein.	Uncharacterized protein.	0.719
LINJ_01_0190	LINJ_23_0820	A4HRE0	A4I0B6	Uncharacterized protein.	Putative spliceosomal U5 snRNP-specific protein.	0.654
LINJ_01_0190	LINJ_25_1440	A4HRE0	A4I1I4	Uncharacterized protein.	Uncharacterized protein.	0.960
LINJ_01_0190	LINJ_26_0730	A4HRE0	A4I207	Uncharacterized protein.	Uncharacterized protein.	0.987
LINJ_01_0190	LINJ_28_2780	A4HRE0	A4I3Z1	Uncharacterized protein.	Putative splicing factor 3B subunit 1.	0.968
LINJ_01_0190	LINJ_30_0590	A4HRE0	A4I585	Uncharacterized protein.	Putative spliceosome-associated protein.	0.964
LINJ_01_0190	LINJ_30_1270	A4HRE0	A4I5F2	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.982
LINJ_01_0190	LINJ_32_1130	A4HRE0	A4I7S4	Uncharacterized protein.	Putative small nuclear ribonucleoprotein.	0.980
LINJ_01_0190	LINJ_32_2350	A4HRE0	A4I843	Uncharacterized protein.	Small nuclear ribonucleoprotein component-like protein.	0.999
LINJ_01_0190	LINJ_32_2630	A4HRE0	A4I870	Uncharacterized protein.	Uncharacterized protein.	0.843
LINJ_01_0190	LINJ_33_3340	A4HRE0	A4I9G0	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.978
LINJ_01_0190	LINJ_34_3670	A4HRE0	A4IAF5	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.847
LINJ_01_0190	LINJ_35_4000	A4HRE0	A4IBT3	Uncharacterized protein.	Putative PRP8 protein homologue.	0.999
LINJ_01_0190	LINJ_35_4150	A4HRE0	A4IBU8	Uncharacterized protein.	Uncharacterized protein.	0.931
LINJ_01_0190	LINJ_35_4530	A4HRE0	A4IBY6	Uncharacterized protein.	Putative sm-f snRNP core complex protein.	0.986
LINJ_01_0190	LINJ_36_0570	A4HRE0	A4ICT3	Uncharacterized protein.	Putative small nuclear ribonucleaoprotein.	0.847
LINJ_01_0190	LINJ_36_3070	A4HRE0	A4ID80	Uncharacterized protein.	Uncharacterized protein.	0.939
LINJ_01_0580	LINJ_02_0110	A4HRH9	A4HRL6	Uncharacterized protein.	Uncharacterized protein.	0.990