12 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_16_1180	Uncharacterized protein. (643 aa)
	LINJ_23_1950	Uncharacterized protein. (794 aa)
	LINJ_03_0500	Uncharacterized protein. (857 aa)
	LINJ_36_4490	Uncharacterized protein. (824 aa)
	LINJ_36_0570	Putative small nuclear ribonucleaoprotein. (141 aa)
	LINJ_32_2630	Uncharacterized protein. (1290 aa)
	LINJ_32_2350	Small nuclear ribonucleoprotein component-like protein. (1017 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LINJ_29_1310	Uncharacterized protein. (477 aa)
	LINJ_27_1890	Putative small nuclear ribonucleoprotein protein. (111 aa)
	LINJ_26_0010	Putative Lsm7p protein. (91 aa)
	LINJ_22_0880	Putative small nuclear ribonucleoprotein. (103 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_03_0500	LINJ_23_1950	E9AG41	E9AH17	Uncharacterized protein.	Uncharacterized protein.	0.564
LINJ_03_0500	LINJ_29_1310	E9AG41	A4I4H9	Uncharacterized protein.	Uncharacterized protein.	0.424
LINJ_03_0500	LINJ_32_1130	E9AG41	A4I7S4	Uncharacterized protein.	Putative small nuclear ribonucleoprotein.	0.995
LINJ_03_0500	LINJ_32_2350	E9AG41	A4I843	Uncharacterized protein.	Small nuclear ribonucleoprotein component-like protein.	0.509
LINJ_03_0500	LINJ_32_2630	E9AG41	A4I870	Uncharacterized protein.	Uncharacterized protein.	0.513
LINJ_03_0500	LINJ_36_0570	E9AG41	A4ICT3	Uncharacterized protein.	Putative small nuclear ribonucleaoprotein.	0.490
LINJ_03_0500	LINJ_36_4490	E9AG41	A4IE46	Uncharacterized protein.	Uncharacterized protein.	0.669
LINJ_22_0880	LINJ_23_1950	A4HZX8	E9AH17	Putative small nuclear ribonucleoprotein.	Uncharacterized protein.	0.995
LINJ_22_0880	LINJ_26_0010	A4HZX8	A4I1T9	Putative small nuclear ribonucleoprotein.	Putative Lsm7p protein.	0.989
LINJ_22_0880	LINJ_27_1890	A4HZX8	A4I304	Putative small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein protein.	0.999
LINJ_22_0880	LINJ_29_1310	A4HZX8	A4I4H9	Putative small nuclear ribonucleoprotein.	Uncharacterized protein.	0.937
LINJ_22_0880	LINJ_32_1130	A4HZX8	A4I7S4	Putative small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_22_0880	LINJ_32_2350	A4HZX8	A4I843	Putative small nuclear ribonucleoprotein.	Small nuclear ribonucleoprotein component-like protein.	0.999
LINJ_22_0880	LINJ_32_2630	A4HZX8	A4I870	Putative small nuclear ribonucleoprotein.	Uncharacterized protein.	0.999
LINJ_22_0880	LINJ_36_0570	A4HZX8	A4ICT3	Putative small nuclear ribonucleoprotein.	Putative small nuclear ribonucleaoprotein.	0.999
LINJ_22_0880	LINJ_36_4490	A4HZX8	A4IE46	Putative small nuclear ribonucleoprotein.	Uncharacterized protein.	0.999
LINJ_23_1950	LINJ_03_0500	E9AH17	E9AG41	Uncharacterized protein.	Uncharacterized protein.	0.564
LINJ_23_1950	LINJ_22_0880	E9AH17	A4HZX8	Uncharacterized protein.	Putative small nuclear ribonucleoprotein.	0.995
LINJ_23_1950	LINJ_27_1890	E9AH17	A4I304	Uncharacterized protein.	Putative small nuclear ribonucleoprotein protein.	0.991
LINJ_23_1950	LINJ_29_1310	E9AH17	A4I4H9	Uncharacterized protein.	Uncharacterized protein.	0.999