11 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_30_0590	Putative spliceosome-associated protein. (474 aa)
	LINJ_30_2790	Uncharacterized protein. (338 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LINJ_36_0570	Putative small nuclear ribonucleaoprotein. (141 aa)
	LINJ_36_3070	Uncharacterized protein. (113 aa)
	LINJ_36_3190	Putative pre-mRNA branch site protein p14. (182 aa)
	LINJ_21_0380	Uncharacterized protein. (237 aa)
	LINJ_22_0880	Putative small nuclear ribonucleoprotein. (103 aa)
	LINJ_26_0010	Putative Lsm7p protein. (91 aa)
	LINJ_30_0570	Uncharacterized protein. (609 aa)
	LINJ_16_1690	Putative U1 small nuclear ribonucleoprotein. (375 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_16_1690	LINJ_22_0880	A4HX57	A4HZX8	Putative U1 small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_16_1690	LINJ_30_0590	A4HX57	A4I585	Putative U1 small nuclear ribonucleoprotein.	Putative spliceosome-associated protein.	0.986
LINJ_16_1690	LINJ_32_1130	A4HX57	A4I7S4	Putative U1 small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_16_1690	LINJ_36_0570	A4HX57	A4ICT3	Putative U1 small nuclear ribonucleoprotein.	Putative small nuclear ribonucleaoprotein.	0.979
LINJ_16_1690	LINJ_36_3070	A4HX57	A4ID80	Putative U1 small nuclear ribonucleoprotein.	Uncharacterized protein.	0.951
LINJ_16_1690	LINJ_36_3190	A4HX57	A4ID92	Putative U1 small nuclear ribonucleoprotein.	Putative pre-mRNA branch site protein p14.	0.443
LINJ_22_0880	LINJ_16_1690	A4HZX8	A4HX57	Putative small nuclear ribonucleoprotein.	Putative U1 small nuclear ribonucleoprotein.	0.999
LINJ_22_0880	LINJ_26_0010	A4HZX8	A4I1T9	Putative small nuclear ribonucleoprotein.	Putative Lsm7p protein.	0.989
LINJ_22_0880	LINJ_30_0590	A4HZX8	A4I585	Putative small nuclear ribonucleoprotein.	Putative spliceosome-associated protein.	0.999
LINJ_22_0880	LINJ_32_1130	A4HZX8	A4I7S4	Putative small nuclear ribonucleoprotein.	Putative small nuclear ribonucleoprotein.	0.999
LINJ_22_0880	LINJ_36_0570	A4HZX8	A4ICT3	Putative small nuclear ribonucleoprotein.	Putative small nuclear ribonucleaoprotein.	0.999
LINJ_22_0880	LINJ_36_3070	A4HZX8	A4ID80	Putative small nuclear ribonucleoprotein.	Uncharacterized protein.	0.985
LINJ_22_0880	LINJ_36_3190	A4HZX8	A4ID92	Putative small nuclear ribonucleoprotein.	Putative pre-mRNA branch site protein p14.	0.918
LINJ_26_0010	LINJ_22_0880	A4I1T9	A4HZX8	Putative Lsm7p protein.	Putative small nuclear ribonucleoprotein.	0.989
LINJ_26_0010	LINJ_30_0590	A4I1T9	A4I585	Putative Lsm7p protein.	Putative spliceosome-associated protein.	0.947
LINJ_26_0010	LINJ_32_1130	A4I1T9	A4I7S4	Putative Lsm7p protein.	Putative small nuclear ribonucleoprotein.	0.980
LINJ_26_0010	LINJ_36_0570	A4I1T9	A4ICT3	Putative Lsm7p protein.	Putative small nuclear ribonucleaoprotein.	0.973
LINJ_26_0010	LINJ_36_3070	A4I1T9	A4ID80	Putative Lsm7p protein.	Uncharacterized protein.	0.958
LINJ_26_0010	LINJ_36_3190	A4I1T9	A4ID92	Putative Lsm7p protein.	Putative pre-mRNA branch site protein p14.	0.715
LINJ_30_0590	LINJ_16_1690	A4I585	A4HX57	Putative spliceosome-associated protein.	Putative U1 small nuclear ribonucleoprotein.	0.986