22 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_32_2350	Small nuclear ribonucleoprotein component-like protein. (1017 aa)
	LINJ_01_0580	Uncharacterized protein. (622 aa)
	LINJ_05_0540	Uncharacterized protein. (135 aa)
	LINJ_15_1530	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	LINJ_16_1300	Uncharacterized protein. (147 aa)
	LINJ_16_1730	Nop domain-containing protein. (239 aa)
	LINJ_17_1030	Putative ATP-dependent RNA helicase. (1669 aa)
	LINJ_22_0880	Putative small nuclear ribonucleoprotein. (103 aa)
	LINJ_23_0820	Putative spliceosomal U5 snRNP-specific protein. (217 aa)
	LINJ_25_1780	Uncharacterized protein. (131 aa)
	LINJ_26_0010	Putative Lsm7p protein. (91 aa)
	LINJ_27_1890	Putative small nuclear ribonucleoprotein protein. (111 aa)
	LINJ_29_0910	Uncharacterized protein. (114 aa)
	LINJ_30_1270	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
	LINJ_32_0180	Putative U2 small nuclear ribonucleoprotein 40K. (308 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (197 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LINJ_35_4150	Uncharacterized protein. (84 aa)
	LINJ_36_0570	Putative small nuclear ribonucleaoprotein. (141 aa)
	LINJ_17_1020	Putative ATP-dependent RNA helicase. (278 aa)
	LINJ_33_0140	Putative trans-splicing factor. (341 aa)
	LINJ_21_1360	Putative U4/U6 small nuclear ribonuclear protein. (610 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_01_0580	LINJ_15_1530	A4HRH9	A4HWN5	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.995
LINJ_01_0580	LINJ_16_1730	A4HRH9	A4HX61	Uncharacterized protein.	Nop domain-containing protein.	0.979
LINJ_01_0580	LINJ_17_1020	A4HRH9	E9AGQ0	Uncharacterized protein.	Putative ATP-dependent RNA helicase.	0.797
LINJ_01_0580	LINJ_17_1030	A4HRH9	A4HXH0	Uncharacterized protein.	Putative ATP-dependent RNA helicase.	0.797
LINJ_01_0580	LINJ_21_1360	A4HRH9	E9AGY0	Uncharacterized protein.	Putative U4/U6 small nuclear ribonuclear protein.	0.910
LINJ_01_0580	LINJ_22_0880	A4HRH9	A4HZX8	Uncharacterized protein.	Putative small nuclear ribonucleoprotein.	0.989
LINJ_01_0580	LINJ_23_0820	A4HRH9	A4I0B6	Uncharacterized protein.	Putative spliceosomal U5 snRNP-specific protein.	0.989
LINJ_01_0580	LINJ_25_1780	A4HRH9	A4I1L8	Uncharacterized protein.	Uncharacterized protein.	0.999
LINJ_01_0580	LINJ_26_0010	A4HRH9	A4I1T9	Uncharacterized protein.	Putative Lsm7p protein.	0.984
LINJ_01_0580	LINJ_27_1890	A4HRH9	A4I304	Uncharacterized protein.	Putative small nuclear ribonucleoprotein protein.	0.987
LINJ_01_0580	LINJ_29_0910	A4HRH9	A4I4E0	Uncharacterized protein.	Uncharacterized protein.	0.934
LINJ_01_0580	LINJ_30_1270	A4HRH9	A4I5F2	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.993
LINJ_01_0580	LINJ_32_0180	A4HRH9	A4I7I1	Uncharacterized protein.	Putative U2 small nuclear ribonucleoprotein 40K.	0.736
LINJ_01_0580	LINJ_32_1130	A4HRH9	A4I7S4	Uncharacterized protein.	Putative small nuclear ribonucleoprotein.	0.995
LINJ_01_0580	LINJ_32_2350	A4HRH9	A4I843	Uncharacterized protein.	Small nuclear ribonucleoprotein component-like protein.	0.999
LINJ_01_0580	LINJ_33_0140	A4HRH9	A4I8M9	Uncharacterized protein.	Putative trans-splicing factor.	0.979
LINJ_01_0580	LINJ_35_4150	A4HRH9	A4IBU8	Uncharacterized protein.	Uncharacterized protein.	0.947
LINJ_01_0580	LINJ_36_0570	A4HRH9	A4ICT3	Uncharacterized protein.	Putative small nuclear ribonucleaoprotein.	0.947
LINJ_01_0580	LSM4	A4HRH9	A4I7N8	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LINJ_15_1530	LINJ_01_0580	A4HWN5	A4HRH9	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Uncharacterized protein.	0.995