8 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (197 aa)
	LINJ_35_4530	Putative sm-f snRNP core complex protein. (76 aa)
	LINJ_35_4150	Uncharacterized protein. (84 aa)
	LINJ_34_3670	Small nuclear ribonucleoprotein Sm D3. (113 aa)
	LINJ_33_3340	Small nuclear ribonucleoprotein Sm D2. (103 aa)
	LINJ_30_1270	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
	LINJ_30_0560	Nuclear cap-binding protein subunit 2. (188 aa)
	LINJ_23_0820	Putative spliceosomal U5 snRNP-specific protein. (217 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_23_0820	LINJ_30_1270	A4I0B6	A4I5F2	Putative spliceosomal U5 snRNP-specific protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.991
LINJ_23_0820	LINJ_33_3340	A4I0B6	A4I9G0	Putative spliceosomal U5 snRNP-specific protein.	Small nuclear ribonucleoprotein Sm D2.	0.982
LINJ_23_0820	LINJ_34_3670	A4I0B6	A4IAF5	Putative spliceosomal U5 snRNP-specific protein.	Small nuclear ribonucleoprotein Sm D3.	0.952
LINJ_23_0820	LINJ_35_4150	A4I0B6	A4IBU8	Putative spliceosomal U5 snRNP-specific protein.	Uncharacterized protein.	0.947
LINJ_23_0820	LINJ_35_4530	A4I0B6	A4IBY6	Putative spliceosomal U5 snRNP-specific protein.	Putative sm-f snRNP core complex protein.	0.996
LINJ_23_0820	LSM4	A4I0B6	A4I7N8	Putative spliceosomal U5 snRNP-specific protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.978
LINJ_30_0560	LINJ_30_1270	A4I582	A4I5F2	Nuclear cap-binding protein subunit 2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
LINJ_30_0560	LINJ_33_3340	A4I582	A4I9G0	Nuclear cap-binding protein subunit 2.	Small nuclear ribonucleoprotein Sm D2.	0.995
LINJ_30_0560	LINJ_34_3670	A4I582	A4IAF5	Nuclear cap-binding protein subunit 2.	Small nuclear ribonucleoprotein Sm D3.	0.938
LINJ_30_0560	LINJ_35_4150	A4I582	A4IBU8	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.571
LINJ_30_0560	LINJ_35_4530	A4I582	A4IBY6	Nuclear cap-binding protein subunit 2.	Putative sm-f snRNP core complex protein.	0.995
LINJ_30_0560	LSM4	A4I582	A4I7N8	Nuclear cap-binding protein subunit 2.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.786
LINJ_30_1270	LINJ_23_0820	A4I5F2	A4I0B6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative spliceosomal U5 snRNP-specific protein.	0.991
LINJ_30_1270	LINJ_30_0560	A4I5F2	A4I582	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Nuclear cap-binding protein subunit 2.	0.996
LINJ_30_1270	LINJ_33_3340	A4I5F2	A4I9G0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
LINJ_30_1270	LINJ_34_3670	A4I5F2	A4IAF5	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3.	0.999
LINJ_30_1270	LINJ_35_4150	A4I5F2	A4IBU8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.997
LINJ_30_1270	LINJ_35_4530	A4I5F2	A4IBY6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative sm-f snRNP core complex protein.	0.999
LINJ_30_1270	LSM4	A4I5F2	A4I7N8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
LINJ_33_3340	LINJ_23_0820	A4I9G0	A4I0B6	Small nuclear ribonucleoprotein Sm D2.	Putative spliceosomal U5 snRNP-specific protein.	0.982