STRINGSTRING
LINJ_14_1350 LINJ_14_1350 LINJ_15_1500 LINJ_15_1500 LINJ_20_1110 LINJ_20_1110 LINJ_24_1010 LINJ_24_1010 LINJ_28_1530 LINJ_28_1530 LINJ_28_1540 LINJ_28_1540 LINJ_28_1550 LINJ_28_1550 RPA1 RPA1 LINJ_30_2620 LINJ_30_2620 LINJ_32_1310 LINJ_32_1310 LINJ_32_1970 LINJ_32_1970 LINJ_34_3980 LINJ_34_3980 LINJ_35_1780 LINJ_35_1780 LINJ_35_3300 LINJ_35_3300 LINJ_35_4430 LINJ_35_4430 LINJ_36_0660 LINJ_36_0660 LINJ_27_2560 LINJ_27_2560 LINJ_36_7020 LINJ_36_7020
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LINJ_14_1350Putative ubiquitin/ribosomal protein S27a. (152 aa)
LINJ_15_1500Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (293 aa)
LINJ_20_1110Uncharacterized protein. (1953 aa)
LINJ_24_1010Putative replication factor C, subunit 1. (660 aa)
LINJ_28_1530Putative DNA polymerase kappa. (753 aa)
LINJ_28_1540Putative DNA polymerase kappa. (598 aa)
LINJ_28_1550Putative DNA polymerase kappa. (409 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (467 aa)
LINJ_30_2620Putative replication factor C, subunit 2. (354 aa)
LINJ_32_1310Putative ubiquitin hydrolase; Belongs to the peptidase C19 family. (540 aa)
LINJ_32_1970Uncharacterized protein. (158 aa)
LINJ_34_3980Uncharacterized protein. (658 aa)
LINJ_35_1780Putative DNA polymerase epsilon subunit b. (552 aa)
LINJ_35_3300Putative replication factor C, subunit 3. (364 aa)
LINJ_35_4430DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2224 aa)
LINJ_36_0660Putative ubiquitin/ribosomal protein S27a. (152 aa)
LINJ_27_2560Putative replication factor C, subunit 4. (360 aa)
LINJ_36_7020Putative replication factor C, subunit 5. (351 aa)
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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