STRINGSTRING
LINJ_19_0040 LINJ_19_0040 LINJ_02_0100 LINJ_02_0100 LINJ_06_0010 LINJ_06_0010 LINJ_06_0280 LINJ_06_0280 LINJ_09_1410 LINJ_09_1410 LINJ_14_1350 LINJ_14_1350 LINJ_15_0010 LINJ_15_0010 LINJ_16_0330 LINJ_16_0330 LINJ_17_0070 LINJ_17_0070 LINJ_17_1320 LINJ_17_1320 LINJ_19_0030 LINJ_19_0030 LINJ_19_1510 LINJ_19_1510 LINJ_27_1790 LINJ_27_1790 LINJ_28_0210 LINJ_28_0210 LINJ_28_0560 LINJ_28_0560 LINJ_35_1320 LINJ_35_1320 LINJ_36_0660 LINJ_36_0660
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LINJ_19_0040Histone H2B; Belongs to the histone H2B family. (107 aa)
LINJ_02_0100Putative phosphatidylinositol kinase related protein; Belongs to the PI3/PI4-kinase family. (4906 aa)
LINJ_06_0010Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa)
LINJ_06_0280Uncharacterized protein. (855 aa)
LINJ_09_1410Histone H2B; Belongs to the histone H2B family. (111 aa)
LINJ_14_1350Putative ubiquitin/ribosomal protein S27a. (152 aa)
LINJ_15_0010Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa)
LINJ_16_0330Uncharacterized protein. (1270 aa)
LINJ_17_0070Putative mitogen-activated protein kinase kinase 3. (553 aa)
LINJ_17_1320Histone H2B; Belongs to the histone H2B family. (111 aa)
LINJ_19_0030Histone H2B; Belongs to the histone H2B family. (135 aa)
LINJ_19_1510Uncharacterized protein. (621 aa)
LINJ_27_1790Putative endo/exonuclease Mre11. (858 aa)
LINJ_28_0210Histone H2B; Belongs to the histone H2B family. (142 aa)
LINJ_28_0560RAD50 DNA repair-like protein. (1360 aa)
LINJ_35_1320Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa)
LINJ_36_0660Putative ubiquitin/ribosomal protein S27a. (152 aa)
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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