Your Input: | |
| | LINJ_27_1790 | Putative endo/exonuclease Mre11. (858 aa) |
| | LINJ_27_1450 | DNA-directed RNA polymerase II-like protein. (134 aa) |
| | LINJ_27_0370 | Putative ATPase. (656 aa) |
| | FEN1 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa) |
| | LINJ_26_1800 | Uncharacterized protein. (284 aa) |
| | LINJ_26_1330 | Putative DNA ligase. (433 aa) |
| | LINJ_26_1320 | Putative DNA ligase k alpha. (630 aa) |
| | LINJ_26_0390 | Uncharacterized protein. (563 aa) |
| | LINJ_25_2310 | Uncharacterized protein. (437 aa) |
| | LINJ_25_2130 | Putative helicase-like protein. (1044 aa) |
| | LINJ_25_1450 | Putative DNA polymerase delta subunit 2. (591 aa) |
| | LinJ25.1380 | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (705 aa) |
| | LINJ_25_1320 | NPL4 domain-containing protein. (247 aa) |
| | LINJ_25_1310 | Uncharacterized protein; Belongs to the cullin family. (1066 aa) |
| | LINJ_30_2620 | Putative replication factor C, subunit 2. (354 aa) |
| | LINJ_25_0400 | Uncharacterized protein. (201 aa) |
| | LINJ_25_0140 | Uncharacterized protein. (129 aa) |
| | LINJ_24_2370 | TFIIH basal transcription factor complex helicase subunit. (813 aa) |
| | CYC10 | Cyclin 10. (658 aa) |
| | CYC11 | Putative cyclin 11. (933 aa) |
| | LINJ_24_1590 | Putative ATP-dependent DEAD/H DNA helicase recQ. (1946 aa) |
| | LINJ_24_1580 | Uncharacterized protein. (1151 aa) |
| | LINJ_24_1460 | Putative mismatch repair protein. (1007 aa) |
| | LINJ_24_1080 | AKAP7_NLS domain-containing protein. (594 aa) |
| | LINJ_24_1010 | Putative replication factor C, subunit 1. (660 aa) |
| | LINJ_24_0910 | Putative DNA polymerase theta (Polymerase domain only). (1169 aa) |
| | LINJ_23_1640 | Putative DNA polymerase theta (Helicase domain only). (2240 aa) |
| | LINJ_23_1590 | Putative DNA polymerase zeta catalytic subunit. (3085 aa) |
| | LINJ_23_1530 | Uncharacterized protein. (1015 aa) |
| | LINJ_23_0100 | Uncharacterized protein. (346 aa) |
| | LINJ_21_2020 | Putative mitochondrial structure specific endonuclease I (SSE-1). (297 aa) |
| | LINJ_21_0180 | DNA topoisomerase 1A. (809 aa) |
| | LINJ_20_1110 | Uncharacterized protein. (1953 aa) |
| | LINJ_20_0070 | Uncharacterized protein. (1165 aa) |
| | LINJ_19_1510 | Uncharacterized protein. (621 aa) |
| | LINJ_19_0030 | Histone H2B; Belongs to the histone H2B family. (135 aa) |
| | LINJ_18_0790 | Putative DNA-directed RNA polymerase II. (342 aa) |
| | LINJ_18_0780 | Putative DNA-directed RNA polymerases II. (239 aa) |
| | LINJ_18_0480 | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (394 aa) |
| | LINJ_17_1320 | Histone H2B; Belongs to the histone H2B family. (111 aa) |
| | LINJ_17_0070 | Putative mitogen-activated protein kinase kinase 3. (553 aa) |
| | LINJ_16_0850 | Putative metallopeptidase. (474 aa) |
| | LINJ_16_0330 | Uncharacterized protein. (1270 aa) |
| | LINJ_15_1500 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (293 aa) |
| | LINJ_15_0010 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa) |
| | LINJ_14_1350 | Putative ubiquitin/ribosomal protein S27a. (152 aa) |
| | LINJ_14_0900 | Putative SNF2 family helicase-like protein. (1261 aa) |
| | LINJ_14_0260 | Uncharacterized protein. (722 aa) |
| | LINJ_13_1370 | Putative mitochondrial DNA polymerase I protein D. (1579 aa) |
| | LINJ_13_1570 | Putative phosphoprotein phosphatase. (433 aa) |
| | LINJ_13_1540 | Uncharacterized protein. (772 aa) |
| | LINJ_13_1020 | Putative DNA-directed RNA polymerase ii 8.2 Kd polypeptide. (89 aa) |
| | LINJ_13_0390 | Putative RNA helicase. (2167 aa) |
| | POLIB | Putative mitochondrial DNA polymerase I protein B. (1430 aa) |
| | LINJ_11_0230 | Uncharacterized protein. (518 aa) |
| | LINJ_10_0780 | Putative deaminase. (281 aa) |
| | LINJ_10_0320 | Uncharacterized protein. (765 aa) |
| | LINJ_09_1410 | Histone H2B; Belongs to the histone H2B family. (111 aa) |
| | LINJ_09_1280 | Putative AAA family ATPase. (1288 aa) |
| | LINJ_36_7020 | Putative replication factor C, subunit 5. (351 aa) |
| | LINJ_27_2560 | Putative replication factor C, subunit 4. (360 aa) |
| | LINJ_25_1350 | DNA-directed RNA polymerase ii. (84 aa) |
| | LINJ_24_1750 | Uncharacterized protein. (445 aa) |
| | LINJ_24_0200 | Putative transcription elongation factor. (333 aa) |
| | LINJ_24_0170 | Putative ATPase domain protein. (535 aa) |
| | LINJ_30_2520 | AAA family ATPase-like protein. (1049 aa) |
| | LINJ_23_1950 | Uncharacterized protein. (794 aa) |
| | LINJ_22_0008 | Uncharacterized protein. (396 aa) |
| | LINJ_21_1100 | Putative mis-match repair protein. (1563 aa) |
| | LINJ_15_1470 | Putative mismatch repair protein MSH3. (1008 aa) |
| | LINJ_14_0980 | Putative mitochondrial DNA polymerase I protein C. (1548 aa) |
| | LINJ_06_0560 | Uncharacterized protein. (976 aa) |
| | LINJ_36_2050 | Putative mismatch repair protein MSH8. (1014 aa) |
| | LINJ_36_3350 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (947 aa) |
| | LINJ_36_0080 | Stress-inducible protein STI1 homolog. (255 aa) |
| | LINJ_36_0110 | Putative DNA damage repair protein. (619 aa) |
| | LINJ_36_0660 | Putative ubiquitin/ribosomal protein S27a. (152 aa) |
| | LINJ_36_0860 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (557 aa) |
| | LINJ_36_1420 | Putative Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (690 aa) |
| | LINJ_36_2780 | Uncharacterized protein. (340 aa) |
| | LINJ_36_2750 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1735 aa) |
| | LINJ_36_6780 | Putative ubiquitin fusion degradation protein. (325 aa) |
| | LINJ_35_4430 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2224 aa) |
| | LINJ_35_3640 | Putative DNA repair protein RAD2. (930 aa) |
| | LINJ_35_3500 | Putative DNA-repair protein. (840 aa) |
| | LINJ_35_3300 | Putative replication factor C, subunit 3. (364 aa) |
| | LINJ_35_1780 | Putative DNA polymerase epsilon subunit b. (552 aa) |
| | LINJ_35_1660 | Putative mismatch repair protein PMS1. (840 aa) |
| | LINJ_35_1320 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa) |
| | LINJ_35_1290 | Uncharacterized protein. (318 aa) |
| | LINJ_34_4070 | Uncharacterized protein. (410 aa) |
| | LINJ_34_3980 | Uncharacterized protein. (658 aa) |
| | LINJ_34_3280 | RuvB-like helicase; Belongs to the RuvB family. (459 aa) |
| | LINJ_34_2110 | Putative asparaginyl-tRNA synthetase. (890 aa) |
| | LINJ_34_1930 | Putative 8-oxoguanine DNA glycosylase. (565 aa) |
| | POL1A | Putative mitochondrial DNA polymerase I protein A. (1257 aa) |
| | LINJ_34_1340 | Uncharacterized protein. (548 aa) |
| | LINJ_34_0940 | Putative DNA-directed RNA polymerase subunit. (159 aa) |
| | TDBP1 | Tyrosyl-DNA phosphodiesterase 1. (682 aa) |
| | LINJ_33_2960 | Uncharacterized protein. (593 aa) |
| | LINJ_33_2950 | Transcription elongation factor-like protein. (473 aa) |
| | LINJ_33_1800 | Transcription activator. (1103 aa) |
| | CYC5 | Putative CYC2-like cyclin. (881 aa) |
| | LINJ_33_0420 | Putative DNA mismatch repair protein. (939 aa) |
| | LINJ_32_4070 | Putative helicase. (806 aa) |
| | LINJ_32_3230 | Serine/threonine-protein phosphatase. (308 aa) |
| | LINJ_32_1970 | Uncharacterized protein. (158 aa) |
| | LINJ_32_1520 | Putative phosphatidylinositol 3-related kinase; Belongs to the PI3/PI4-kinase family. (3211 aa) |
| | LINJ_32_1460 | Putative DEAD/DEAH box helicase-like protein. (1689 aa) |
| | LINJ_32_1340 | Putative RNA polymerase-like protein. (199 aa) |
| | LINJ_32_1310 | Putative ubiquitin hydrolase; Belongs to the peptidase C19 family. (540 aa) |
| | CYC2 | Cyclin; Belongs to the cyclin family. (164 aa) |
| | LINJ_32_0570 | Uncharacterized protein. (511 aa) |
| | LINJ_32_0680 | Uncharacterized protein. (282 aa) |
| | LINJ_31_2780 | Uncharacterized protein. (891 aa) |
| | LINJ_31_2390 | Helicase-like protein. (908 aa) |
| | LINJ_31_1740 | Uncharacterized protein; Belongs to the cullin family. (1198 aa) |
| | LINJ_31_0170 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1181 aa) |
| | CYC7 | Putative CYC2-like protein. (253 aa) |
| | LINJ_30_3490 | DNA ligase. (667 aa) |
| | LINJ_30_3350 | UV excision repair RAD23-like protein. (429 aa) |
| | LINJ_30_3770 | Putative CPSF-domain protein. (1347 aa) |
| | LINJ_27_2430 | Uncharacterized protein. (513 aa) |
| | LINJ_28_0120 | Putative DNA-direcetd RNA polymerase II, subunit 9. (140 aa) |
| | LINJ_28_0210 | Histone H2B; Belongs to the histone H2B family. (142 aa) |
| | LINJ_28_0560 | RAD50 DNA repair-like protein. (1360 aa) |
| | RAD51 | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (376 aa) |
| | LINJ_28_0870 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (149 aa) |
| | LINJ_28_1530 | Putative DNA polymerase kappa. (753 aa) |
| | LINJ_28_1540 | Putative DNA polymerase kappa. (598 aa) |
| | LINJ_28_1550 | Putative DNA polymerase kappa. (409 aa) |
| | LINJ_28_1580 | Putative ATPase. (696 aa) |
| | RPA1 | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (467 aa) |
| | LINJ_28_2260 | Uncharacterized protein; Belongs to the cullin family. (766 aa) |
| | LINJ_28_2290 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (501 aa) |
| | LINJ_28_2870 | Serine/threonine-protein phosphatase. (307 aa) |
| | LINJ_28_2910 | Uncharacterized protein. (286 aa) |
| | LINJ_29_0140 | DNA-directed RNA polymerase I-like protein. (337 aa) |
| | LINJ_30_2300 | ATP-dependent DEAD/H DNA helicase recQ family-like protein. (1003 aa) |
| | LINJ_30_0340 | Putative KU80 protein. (798 aa) |
| | LINJ_29_1910 | Uncharacterized protein. (1174 aa) |
| | LINJ_29_1700 | Uncharacterized protein. (400 aa) |
| | LINJ_29_0610 | Putative DNA repair helicase. (1106 aa) |
| | LINJ_29_0460 | Uncharacterized protein. (649 aa) |
| | LINJ_27_2340 | Putative TPR-repeat protein. (488 aa) |
| | NTH1 | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (258 aa) |
| | LINJ_08_0840 | Putative mitochondrial DNA polymerase beta-PAK. (1481 aa) |
| | LINJ_08_0830 | DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (376 aa) |
| | LINJ_08_0480 | Putative small ubiquitin protein. (117 aa) |
| | LINJ_08_0150 | Putative DNA repair protein. (1260 aa) |
| | LINJ_07_0020 | Uncharacterized protein. (293 aa) |
| | LINJ_06_0280 | Uncharacterized protein. (855 aa) |
| | LINJ_06_0130 | Uncharacterized protein. (186 aa) |
| | LINJ_06_0010 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa) |
| | LINJ_05_0710 | Putative CYC2-like cyclin. (1400 aa) |
| | LINJ_05_0430 | Uncharacterized protein. (675 aa) |
| | LINJ_02_0550 | Uncharacterized protein. (3788 aa) |
| | LINJ_02_0360 | Putative ubiquitin-conjugating enzyme e2; Belongs to the ubiquitin-conjugating enzyme family. (152 aa) |
| | LINJ_02_0100 | Putative phosphatidylinositol kinase related protein; Belongs to the PI3/PI4-kinase family. (4906 aa) |
| | LINJ_01_0260 | Uncharacterized protein. (281 aa) |
| | LINJ_01_0240 | Putative DNA excision/repair protein SNF2. (776 aa) |
| | LINJ_19_0040 | Histone H2B; Belongs to the histone H2B family. (107 aa) |
