23 items (Leishmania infantum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LINJ_05_0190	Uncharacterized protein. (361 aa)
	LINJ_14_1260	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (709 aa)
	LINJ_25_0170	Cleavage and polyadenylation specificity factor subunit 2. (819 aa)
	LINJ_25_0950	Uncharacterized protein. (852 aa)
	LINJ_25_1910	Uncharacterized protein. (998 aa)
	LINJ_25_2270	Uncharacterized protein. (445 aa)
	LINJ_26_0280	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (271 aa)
	MP100	Putative RNA-editing complex protein MP100. (993 aa)
	LINJ_29_2710	Putative poly(A) polymerase. (500 aa)
	LINJ_30_0560	Nuclear cap-binding protein subunit 2. (188 aa)
	LINJ_30_1270	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)
	LINJ_30_2420	Pre-mRNA cleavage complex II Clp1-like protein. (425 aa)
	LINJ_31_0220	Uncharacterized protein. (521 aa)
	LINJ_32_1130	Putative small nuclear ribonucleoprotein. (81 aa)
	LINJ_32_1400	Cleavage and polyadenylation specificity factor-like protein. (1542 aa)
	LINJ_32_2260	Uncharacterized protein. (404 aa)
	LINJ_32_4100	Uncharacterized protein. (994 aa)
	LINJ_33_0300	Uncharacterized protein. (511 aa)
	LINJ_34_3210	Putative cleavage and polyadenylation specificity factor. (756 aa)
	LINJ_34_3670	Small nuclear ribonucleoprotein Sm D3. (113 aa)
	LINJ_35_4530	Putative sm-f snRNP core complex protein. (76 aa)
	LINJ_36_0570	Putative small nuclear ribonucleaoprotein. (141 aa)
	LINJ_36_3900	Uncharacterized protein. (452 aa)

Your Current Organism:

Leishmania infantum

NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LINJ_05_0190	LINJ_14_1260	A4HSD3	A4HW64	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.895
LINJ_05_0190	LINJ_25_0170	A4HSD3	A4I159	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
LINJ_05_0190	LINJ_25_2270	A4HSD3	A4I1R6	Uncharacterized protein.	Uncharacterized protein.	0.712
LINJ_05_0190	LINJ_26_0280	A4HSD3	A4I1W6	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.987
LINJ_05_0190	LINJ_29_2710	A4HSD3	A4I4T6	Uncharacterized protein.	Putative poly(A) polymerase.	0.895
LINJ_05_0190	LINJ_30_0560	A4HSD3	A4I582	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.806
LINJ_05_0190	LINJ_30_2420	A4HSD3	A4I5R9	Uncharacterized protein.	Pre-mRNA cleavage complex II Clp1-like protein.	0.712
LINJ_05_0190	LINJ_31_0220	A4HSD3	A4I6B3	Uncharacterized protein.	Uncharacterized protein.	0.712
LINJ_05_0190	LINJ_32_1400	A4HSD3	A4I7V5	Uncharacterized protein.	Cleavage and polyadenylation specificity factor-like protein.	0.999
LINJ_05_0190	LINJ_32_2260	A4HSD3	A4I835	Uncharacterized protein.	Uncharacterized protein.	0.999
LINJ_05_0190	LINJ_32_4100	A4HSD3	A4I8L3	Uncharacterized protein.	Uncharacterized protein.	0.999
LINJ_05_0190	LINJ_33_0300	A4HSD3	A4I8P5	Uncharacterized protein.	Uncharacterized protein.	0.876
LINJ_05_0190	LINJ_34_3210	A4HSD3	A4IAA9	Uncharacterized protein.	Putative cleavage and polyadenylation specificity factor.	0.999
LINJ_05_0190	LINJ_36_3900	A4HSD3	A4ID25	Uncharacterized protein.	Uncharacterized protein.	0.712
LINJ_05_0190	MP100	A4HSD3	A4I216	Uncharacterized protein.	Putative RNA-editing complex protein MP100.	0.895
LINJ_14_1260	LINJ_05_0190	A4HW64	A4HSD3	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.895
LINJ_14_1260	LINJ_25_0170	A4HW64	A4I159	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Cleavage and polyadenylation specificity factor subunit 2.	0.895
LINJ_14_1260	LINJ_25_2270	A4HW64	A4I1R6	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.432
LINJ_14_1260	LINJ_26_0280	A4HW64	A4I1W6	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.661
LINJ_14_1260	LINJ_29_2710	A4HW64	A4I4T6	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Putative poly(A) polymerase.	0.919