STRINGSTRING
snrpb2 snrpb2 LOC115007802 LOC115007802 prpf38a prpf38a ENSCGOP00000000548 ENSCGOP00000000548 LOC115006936 LOC115006936 wbp4 wbp4 snrpa1 snrpa1 ppih ppih snrpc snrpc DDX41 DDX41 dhx40 dhx40 ddx46 ddx46 dhx16 dhx16 LOC115006517 LOC115006517 fam32a fam32a txnl4a txnl4a slu7 slu7 scnm1 scnm1 LOC115014475 LOC115014475 sf3b1 sf3b1 ppil3 ppil3 cwf19l2 cwf19l2 zmat2 zmat2 ddx42 ddx42 ik ik ppil4 ppil4 sf3a3 sf3a3 ENSCGOP00000010844 ENSCGOP00000010844 prpf3 prpf3 bud31 bud31 ppil6 ppil6 nsrp1 nsrp1 zcrb1 zcrb1 sf3a1 sf3a1 wbp11 wbp11 prpf8 prpf8 rbm22 rbm22 ENSCGOP00000016326 ENSCGOP00000016326 c6hxorf56 c6hxorf56 cript cript sf3b4 sf3b4 lrmda lrmda mtrex mtrex ddx23 ddx23 ppp1r10 ppp1r10 bcas2 bcas2 dhx29 dhx29 snrpa snrpa ENSCGOP00000020340 ENSCGOP00000020340 luc7l luc7l UBL5 UBL5 wdr53 wdr53 ENSCGOP00000021419 ENSCGOP00000021419 rnpc3 rnpc3 sf3b3 sf3b3 phf5a phf5a cwc25 cwc25 naa38 naa38 snrpe snrpe snrnp70 snrnp70 dhx34 dhx34 ncbp2 ncbp2 gpkow gpkow pqbp1 pqbp1 LOC115023589 LOC115023589 LOC115027490 LOC115027490 sf3a2 sf3a2 LOC115028506 LOC115028506 LOC115015699 LOC115015699 ppie ppie rbm48 rbm48 ENSCGOP00000027269 ENSCGOP00000027269 xab2 xab2 LOC115016452 LOC115016452 ppil1 ppil1 snw1 snw1 TCERG1 TCERG1 LOC115018662 LOC115018662 SNIP1 SNIP1 ENSCGOP00000032881 ENSCGOP00000032881 prpf18 prpf18 ENSCGOP00000033057 ENSCGOP00000033057 tfip11 tfip11 LOC115017406 LOC115017406 snrpd2 snrpd2 cdc40 cdc40 cwc27 cwc27 SMU1 SMU1 ppwd1 ppwd1 LOC115011921 LOC115011921 LOC115014693 LOC115014693 usp39 usp39 ENSCGOP00000035501 ENSCGOP00000035501 ENSCGOP00000035502 ENSCGOP00000035502 prkrip1 prkrip1 ddx59 ddx59 ENSCGOP00000036193 ENSCGOP00000036193 LOC115022031 LOC115022031 SART1 SART1 txnl4b txnl4b LOC115024940 LOC115024940 WDR70 WDR70 sf3b6 sf3b6 snrnp200 snrnp200 snrnp40 snrnp40 zcchc17 zcchc17 ENSCGOP00000038432 ENSCGOP00000038432 prpf31 prpf31 LOC115006340 LOC115006340 crnkl1 crnkl1 syf2 syf2 WDR25 WDR25 sf3b5 sf3b5 ENSCGOP00000039752 ENSCGOP00000039752 ZNF830 ZNF830 dhx32 dhx32 ENSCGOP00000041443 ENSCGOP00000041443 bud13 bud13 cwc15 cwc15 sf3b2 sf3b2 mfap1 mfap1 dhx33 dhx33 plrg1 plrg1 armc7 armc7 tcerg1l tcerg1l prpf6 prpf6 zmat5 zmat5 LOC115014469 LOC115014469 snrpg snrpg dhx35 dhx35 eftud2 eftud2 LOC115025076 LOC115025076 LOC115022958 LOC115022958 dhx30 dhx30 dhx38 dhx38 snrpd3 snrpd3 ctnnbl1 ctnnbl1 wac wac LOC115020141 LOC115020141 ENSCGOP00000051726 ENSCGOP00000051726 ENSCGOP00000051749 ENSCGOP00000051749 GPR149 GPR149 dhx36 dhx36 PPIG PPIG sf1 sf1 LOC115025619 LOC115025619 rnf113a rnf113a ccdc12 ccdc12 cwc22 cwc22 prpf39 prpf39 snrpd1 snrpd1 DDX5 DDX5 yju2 yju2 LOC115027479 LOC115027479 srrt srrt LOC115023934 LOC115023934 ENSCGOP00000056318 ENSCGOP00000056318 ppil2 ppil2 aqr aqr
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
snrpb2Small nuclear ribonucleoprotein polypeptide B2. (218 aa)
LOC115007802WD40 repeat-containing protein SMU1-like. (511 aa)
prpf38apre-mRNA processing factor 38A. (311 aa)
ENSCGOP00000000548annotation not available (200 aa)
LOC115006936pre-mRNA-splicing factor 38A-like. (177 aa)
wbp4WW domain binding protein 4. (356 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (304 aa)
ppihPeptidylprolyl isomerase H. (229 aa)
snrpcSmall nuclear ribonucleoprotein polypeptide C. (148 aa)
DDX41DEAD-box helicase 41. (620 aa)
dhx40DEAH-box helicase 40. (763 aa)
ddx46DEAD-box helicase 46. (1075 aa)
dhx16DEAH-box helicase 16. (1055 aa)
LOC115006517Peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like. (1202 aa)
fam32aFamily with sequence similarity 32 member A. (112 aa)
txnl4aThioredoxin like 4A. (194 aa)
slu7SLU7 homolog, splicing factor. (600 aa)
scnm1Sodium channel modifier 1. (263 aa)
LOC115014475pre-mRNA-processing factor 19-like. (494 aa)
sf3b1Splicing factor 3b subunit 1. (1317 aa)
ppil3Peptidylprolyl isomerase like 3. (161 aa)
cwf19l2CWF19 like cell cycle control factor 2. (1024 aa)
zmat2Zinc finger matrin-type 2. (203 aa)
ddx42DEAD-box helicase 42. (927 aa)
ikIK cytokine. (549 aa)
ppil4Peptidylprolyl isomerase like 4. (454 aa)
sf3a3Splicing factor 3a subunit 3. (513 aa)
ENSCGOP00000010844annotation not available (577 aa)
prpf3pre-mRNA processing factor 3. (701 aa)
bud31BUD31 homolog. (144 aa)
ppil6Peptidylprolyl isomerase like 6. (319 aa)
nsrp1Nuclear speckle splicing regulatory protein 1. (479 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif containing 1. (225 aa)
sf3a1Splicing factor 3a subunit 1. (749 aa)
wbp11WW domain binding protein 11. (733 aa)
prpf8pre-mRNA processing factor 8. (2332 aa)
rbm22RNA binding motif protein 22. (361 aa)
ENSCGOP00000016326annotation not available (212 aa)
c6hxorf56Chromosome 6 CXorf56 homolog. (225 aa)
criptCXXC repeat containing interactor of PDZ3 domain. (101 aa)
sf3b4Splicing factor 3b subunit 4. (401 aa)
lrmdaLeucine rich melanocyte differentiation associated. (233 aa)
mtrexMtr4 exosome RNA helicase. (1036 aa)
ddx23DEAD-box helicase 23. (798 aa)
ppp1r10Protein phosphatase 1 regulatory subunit 10. (848 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
dhx29DExH-box helicase 29. (1281 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (282 aa)
ENSCGOP00000020340Organic solute carrier partner 1a. (115 aa)
luc7lLUC7 like. (362 aa)
UBL5Ubiquitin like 5. (73 aa)
wdr53WD repeat domain 53. (391 aa)
ENSCGOP00000021419annotation not available (657 aa)
rnpc3RNA binding region (RNP1, RRM) containing 3. (482 aa)
sf3b3Splicing factor 3b subunit 3. (1217 aa)
phf5aPHD finger protein 5A. (110 aa)
cwc25CWC25 spliceosome associated protein homolog. (402 aa)
naa38N(alpha)-acetyltransferase 38, NatC auxiliary subunit. (114 aa)
snrpeSmall nuclear ribonucleoprotein polypeptide E. (101 aa)
snrnp70Small nuclear ribonucleoprotein U1 subunit 70. (354 aa)
dhx34DExH-box helicase 34. (1147 aa)
ncbp2Nuclear cap binding protein subunit 2. (149 aa)
gpkowG-patch domain and KOW motifs. (526 aa)
pqbp1Polyglutamine binding protein 1. (194 aa)
LOC115023589pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like. (730 aa)
LOC115027490RNA-binding protein 25-like. (785 aa)
sf3a2Splicing factor 3a subunit 2. (293 aa)
LOC115028506Nucleolar RNA helicase 2-like. (749 aa)
LOC115015699tRNA selenocysteine 1-associated protein 1-like. (304 aa)
ppiePeptidylprolyl isomerase E. (307 aa)
rbm48RNA binding motif protein 48. (360 aa)
ENSCGOP00000027269annotation not available (65 aa)
xab2XPA binding protein 2. (829 aa)
LOC115016452ATP-dependent RNA helicase DQX1-like. (816 aa)
ppil1Peptidylprolyl isomerase like 1. (166 aa)
snw1SNW domain containing 1. (588 aa)
TCERG1Transcription elongation regulator 1-like. (958 aa)
LOC115018662HIV Tat-specific factor 1 homolog. (503 aa)
SNIP1Smad nuclear interacting protein 1. (382 aa)
ENSCGOP00000032881annotation not available (534 aa)
prpf18pre-mRNA processing factor 18. (350 aa)
ENSCGOP00000033057annotation not available (493 aa)
tfip11Tuftelin interacting protein 11. (831 aa)
LOC115017406Leucine-rich repeat-containing protein 51-like. (180 aa)
snrpd2Small nuclear ribonucleoprotein D2 polypeptide. (118 aa)
cdc40Cell division cycle 40. (645 aa)
cwc27CWC27 spliceosome associated cyclophilin. (490 aa)
SMU1WD40 repeat-containing protein SMU1. (513 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (628 aa)
LOC115011921Serine/arginine repetitive matrix protein 2-like. (1244 aa)
LOC115014693pre-mRNA-processing factor 39-like. (655 aa)
usp39Ubiquitin specific peptidase 39. (502 aa)
ENSCGOP00000035501annotation not available (157 aa)
ENSCGOP00000035502annotation not available (166 aa)
prkrip1PRKR interacting protein 1. (189 aa)
ddx59DEAD-box helicase 59. (591 aa)
ENSCGOP00000036193annotation not available (185 aa)
LOC115022031Cactin-like. (794 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (774 aa)
txnl4bThioredoxin like 4B. (149 aa)
LOC115024940Leucine-rich repeat-containing protein 51-like. (173 aa)
WDR70WD repeat domain 70. (650 aa)
sf3b6Splicing factor 3b subunit 6. (125 aa)
snrnp200Small nuclear ribonucleoprotein U5 subunit 200. (2126 aa)
snrnp40Small nuclear ribonucleoprotein U5 subunit 40. (347 aa)
zcchc17Zinc finger CCHC-type containing 17. (257 aa)
ENSCGOP00000038432annotation not available (366 aa)
prpf31pre-mRNA processing factor 31. (508 aa)
LOC115006340GC-rich sequence DNA-binding factor 2-like. (863 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (838 aa)
syf2SYF2 pre-mRNA splicing factor. (233 aa)
WDR25WD repeat domain 25. (514 aa)
sf3b5Splicing factor 3b subunit 5. (86 aa)
ENSCGOP00000039752annotation not available (175 aa)
ZNF830Zinc finger protein 830. (338 aa)
dhx32DEAH-box helicase 32 (putative). (739 aa)
ENSCGOP00000041443Small nuclear ribonucleoprotein 35 (U11/U12). (201 aa)
bud13BUD13 homolog. (384 aa)
cwc15CWC15 spliceosome associated protein homolog. (261 aa)
sf3b2Splicing factor 3b subunit 2. (839 aa)
mfap1Microfibril associated protein 1. (441 aa)
dhx33DEAH-box helicase 33. (681 aa)
plrg1Pleiotropic regulator 1. (512 aa)
armc7Armadillo repeat containing 7. (194 aa)
tcerg1lTranscription elongation regulator 1 like. (521 aa)
prpf6pre-mRNA processing factor 6. (1018 aa)
zmat5Zinc finger matrin-type 5. (175 aa)
LOC115014469Putative RNA-binding protein Luc7-like 2. (437 aa)
snrpgSmall nuclear ribonucleoprotein polypeptide G. (76 aa)
dhx35DEAH-box helicase 35. (700 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
LOC115025076ATP-dependent RNA helicase DHX8. (1213 aa)
LOC115022958tRNA selenocysteine 1-associated protein 1-like. (334 aa)
dhx30DExH-box helicase 30. (1165 aa)
dhx38DEAH-box helicase 38. (1249 aa)
snrpd3Small nuclear ribonucleoprotein D3 polypeptide. (127 aa)
ctnnbl1Catenin beta like 1. (578 aa)
wacWW domain containing adaptor with coiled-coil. (617 aa)
LOC115020141Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. (733 aa)
ENSCGOP00000051726annotation not available (93 aa)
ENSCGOP00000051749Small nuclear ribonucleoprotein polypeptide F. (85 aa)
GPR149G protein-coupled receptor 149. (757 aa)
dhx36DEAH-box helicase 36. (771 aa)
PPIGPeptidylprolyl isomerase G. (703 aa)
sf1Splicing factor 1. (694 aa)
LOC115025619Serine/threonine-protein kinase PRP4 homolog. (853 aa)
rnf113aRing finger protein 113A. (324 aa)
ccdc12Coiled-coil domain containing 12. (176 aa)
cwc22CWC22 spliceosome associated protein homolog. (1037 aa)
prpf39pre-mRNA processing factor 39. (799 aa)
snrpd1Small nuclear ribonucleoprotein D1 polypeptide. (130 aa)
DDX5DEAD-box helicase 5. (638 aa)
yju2YJU2 splicing factor homolog. (343 aa)
LOC115027479SH2 domain-containing adapter protein F-like. (407 aa)
srrtSerrate, RNA effector molecule. (899 aa)
LOC115023934Leucine-rich repeat-containing protein 72-like. (203 aa)
ENSCGOP00000056318annotation not available (594 aa)
ppil2Peptidylprolyl isomerase like 2. (525 aa)
aqrAquarius intron-binding spliceosomal factor. (1495 aa)
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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