STRINGSTRING
slu7 slu7 prpf18 prpf18 LOC115011921 LOC115011921 dhx38 dhx38 yju2 yju2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slu7SLU7 homolog, splicing factor. (600 aa)
prpf18pre-mRNA processing factor 18. (350 aa)
LOC115011921Serine/arginine repetitive matrix protein 2-like. (1244 aa)
dhx38DEAH-box helicase 38. (1249 aa)
yju2YJU2 splicing factor homolog. (343 aa)
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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