(34 nodes) Clathrin coat, and Clathrin-dependent synaptic vesicle endocytosis network (Cottoperca gobio)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC115014915	Epsin-3-like. (597 aa)
	clta	Clathrin light chain A. (232 aa)
	ap1g1	Adaptor related protein complex 1 subunit gamma 1. (833 aa)
	cltb	Clathrin light chain B. (231 aa)
	necap2	NECAP endocytosis associated 2. (255 aa)
	LOC115006911	Epidermal growth factor receptor substrate 15-like 1. (876 aa)
	LOC115007593	F-BAR domain only protein 1-like. (1261 aa)
	LOC115018632	Phosphatidylinositol-binding clathrin assembly protein-like. (689 aa)
	eps15	Epidermal growth factor receptor pathway substrate 15. (1069 aa)
	gak	Cyclin G associated kinase. (1312 aa)
	ap2s1	Adaptor related protein complex 2 subunit sigma 1. (156 aa)
	ap1b1	Adaptor related protein complex 1 subunit beta 1. (955 aa)
	LOC115028946	AP-2 complex subunit alpha-2-like. (631 aa)
	LOC115016099	Adaptin ear-binding coat-associated protein 1-like. (262 aa)
	LOC115018414	Phosphatidylinositol-binding clathrin assembly protein-like. (726 aa)
	AP2M1	AP-2 complex subunit mu-A. (452 aa)
	ap2a1	Adaptor related protein complex 2 subunit alpha 1. (967 aa)
	LOC115021431	Adaptin ear-binding coat-associated protein 1-like. (253 aa)
	LOC115021072	Epsin-1-like. (658 aa)
	LOC115028938	Clathrin coat assembly protein AP180-like. (583 aa)
	LOC115017313	Clathrin heavy chain 1-like. (1684 aa)
	LOC115018207	AP-2 complex subunit mu-B-like. (457 aa)
	cltc	Clathrin heavy chain. (1685 aa)
	LOC115013192	Clathrin heavy chain 1-like. (1684 aa)
	LOC115004002	Intersectin-2-like. (1594 aa)
	LOC115013804	Huntingtin-interacting protein 1-related protein-like. (1076 aa)
	ap4b1	Adaptor related protein complex 4 subunit beta 1. (823 aa)
	LOC115018699	AP-1 complex subunit beta-1. (980 aa)
	ENSCGOP00000049747	annotation not available (238 aa)
	LOC115020435	Intersectin-1-like. (1662 aa)
	dnajc6	DnaJ heat shock protein family (Hsp40) member C6. (859 aa)
	epn3	Epsin 3. (611 aa)
	itsn2	Intersectin 2. (1602 aa)
	LOC115022064	Epidermal growth factor receptor substrate 15-like 1. (859 aa)

Your Current Organism:

Cottoperca gobio

NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP2M1	ENSCGOP00000049747	ENSCGOP00000026710	ENSCGOP00000049747	AP-2 complex subunit mu-A.	annotation not available	0.964
AP2M1	LOC115004002	ENSCGOP00000026710	ENSCGOP00000041060	AP-2 complex subunit mu-A.	Intersectin-2-like.	0.999
AP2M1	LOC115006911	ENSCGOP00000026710	ENSCGOP00000005411	AP-2 complex subunit mu-A.	Epidermal growth factor receptor substrate 15-like 1.	0.877
AP2M1	LOC115007593	ENSCGOP00000026710	ENSCGOP00000006408	AP-2 complex subunit mu-A.	F-BAR domain only protein 1-like.	0.869
AP2M1	LOC115013192	ENSCGOP00000026710	ENSCGOP00000039335	AP-2 complex subunit mu-A.	Clathrin heavy chain 1-like.	0.903
AP2M1	LOC115013804	ENSCGOP00000026710	ENSCGOP00000042430	AP-2 complex subunit mu-A.	Huntingtin-interacting protein 1-related protein-like.	0.761
AP2M1	LOC115014915	ENSCGOP00000026710	ENSCGOP00000000247	AP-2 complex subunit mu-A.	Epsin-3-like.	0.755
AP2M1	LOC115016099	ENSCGOP00000026710	ENSCGOP00000023180	AP-2 complex subunit mu-A.	Adaptin ear-binding coat-associated protein 1-like.	0.920
AP2M1	LOC115017313	ENSCGOP00000026710	ENSCGOP00000033359	AP-2 complex subunit mu-A.	Clathrin heavy chain 1-like.	0.869
AP2M1	LOC115018414	ENSCGOP00000026710	ENSCGOP00000024424	AP-2 complex subunit mu-A.	Phosphatidylinositol-binding clathrin assembly protein-like.	0.789
AP2M1	LOC115018632	ENSCGOP00000026710	ENSCGOP00000011651	AP-2 complex subunit mu-A.	Phosphatidylinositol-binding clathrin assembly protein-like.	0.789
AP2M1	LOC115018699	ENSCGOP00000026710	ENSCGOP00000047988	AP-2 complex subunit mu-A.	AP-1 complex subunit beta-1.	0.983
AP2M1	LOC115020435	ENSCGOP00000026710	ENSCGOP00000049751	AP-2 complex subunit mu-A.	Intersectin-1-like.	0.997
AP2M1	LOC115021072	ENSCGOP00000026710	ENSCGOP00000031260	AP-2 complex subunit mu-A.	Epsin-1-like.	0.755
AP2M1	LOC115021431	ENSCGOP00000026710	ENSCGOP00000031237	AP-2 complex subunit mu-A.	Adaptin ear-binding coat-associated protein 1-like.	0.920
AP2M1	LOC115022064	ENSCGOP00000026710	ENSCGOP00000056003	AP-2 complex subunit mu-A.	Epidermal growth factor receptor substrate 15-like 1.	0.877
AP2M1	LOC115028938	ENSCGOP00000026710	ENSCGOP00000031291	AP-2 complex subunit mu-A.	Clathrin coat assembly protein AP180-like.	0.789
AP2M1	LOC115028946	ENSCGOP00000026710	ENSCGOP00000021402	AP-2 complex subunit mu-A.	AP-2 complex subunit alpha-2-like.	0.988
AP2M1	ap1b1	ENSCGOP00000026710	ENSCGOP00000019443	AP-2 complex subunit mu-A.	Adaptor related protein complex 1 subunit beta 1.	0.978
AP2M1	ap1g1	ENSCGOP00000026710	ENSCGOP00000002098	AP-2 complex subunit mu-A.	Adaptor related protein complex 1 subunit gamma 1.	0.910